RNA–Protein interactions for RNA: ENST00000470788.1

CNIH3-203, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 846 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-203ENST00000470788 MAN2A2P49641 1150 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 IRF9Q00978 393 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 ROM1Q03395 351 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 G3BP1Q13283 466 aaKnown RBP eCLIP7.24□□□□□ -1.25
CNIH3-203ENST00000470788 HLFQ16534 295 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 CCDC144BQ3MJ40 725 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 TRIM61Q5EBN2 209 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 SSH3Q8TE77 659 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 SUCLG2Q96I99 432 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 SFMBT1Q9UHJ3 866 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 NARFQ9UHQ1 456 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 AK9Q5TCS8 1911 aa7.24□□□□□ -1.25
CNIH3-203ENST00000470788 GOLGB1Q14789 3259 aaKnown RBP7.23□□□□□ -1.25
CNIH3-203ENST00000470788 CAMTA2O94983 1202 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 RASGRP1O95267 797 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 PTGS2P35354 604 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 FNTBP49356 437 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 MTX1Q13505 466 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 DGKDQ16760 1214 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 TAF7LQ5H9L4 462 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 CATSPEREQ5SY80 951 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 CHD1LQ86WJ1 897 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 ERC1Q8IUD2 1116 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 ZNF34Q8IZ26 560 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 CRAMP1Q96RY5 1269 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 UTP14AQ9BVJ6 771 aaKnown RBP7.23□□□□□ -1.25
CNIH3-203ENST00000470788 BOCQ9BWV1 1114 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 NYXQ9GZU5 481 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 BICC1Q9H694 974 aaKnown RBP7.23□□□□□ -1.25
CNIH3-203ENST00000470788 NIP7Q9Y221 180 aaKnown RBP eCLIP7.23□□□□□ -1.25
CNIH3-203ENST00000470788 DMRT1Q9Y5R6 373 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 CDHR2Q9BYE9 1310 aa7.23□□□□□ -1.25
CNIH3-203ENST00000470788 TUBGCP6Q96RT7 1819 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 SPEF2Q9C093 1822 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 QSER1Q2KHR3 1735 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 DDX60Q8IY21 1712 aaKnown RBP7.22□□□□□ -1.25
CNIH3-203ENST00000470788 PNMA6EA0A0J9YXQ4 647 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 PDE8AO60658 829 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 BPIFB4P59827 614 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 SMAD3P84022 425 aaKnown RBP7.22□□□□□ -1.25
CNIH3-203ENST00000470788 NUCB1Q02818 461 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 CCDC57Q2TAC2 916 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 GAGE13Q4V321 117 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 TM4SF20Q53R12 229 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 FAM111BQ6SJ93 734 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 LMBR1LQ6UX01 489 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
CNIH3-203ENST00000470788 MKL1Q969V6 931 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 KIF1BPQ96EK5 621 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 LRRCC1Q9C099 1032 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 ZSWIM4Q9H7M6 989 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 EXOC6BQ9Y2D4 811 aa7.22□□□□□ -1.25
CNIH3-203ENST00000470788 RBM8AQ9Y5S9 174 aaKnown RBP7.22□□□□□ -1.25
CNIH3-203ENST00000470788 TRAF5O00463 557 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 MAFGO15525 162 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 RASA3Q14644 834 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 BMS1Q14692 1282 aaKnown RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 TMEM177Q53S58 311 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 SUSD4Q5VX71 490 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 MFSD5Q6N075 450 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 GAREM2Q75VX8 874 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 IGSF22Q8N9C0 903 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 ANKRD53Q8N9V6 530 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 ZSWIM2Q8NEG5 633 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 SLC7A14Q8TBB6 771 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 FOXRED1Q96CU9 486 aaPredicted RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 RPL10LQ96L21 214 aaKnown RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 SRPK1Q96SB4 655 aaKnown RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 TCF25Q9BQ70 676 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 MRPL4Q9BYD3 311 aaKnown RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 TFCP2L1Q9NZI6 479 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.26
CNIH3-203ENST00000470788 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
CNIH3-203ENST00000470788 ANKRD18BA2A2Z9 1011 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 DAPK3O43293 454 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 MFAP3LO75121 409 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 HSPA6P17066 643 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 STAT3P40763 770 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 IFIT5Q13325 482 aaKnown RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 ELAVL1Q15717 326 aaKnown RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 GPR162Q16538 588 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 RABL6Q3YEC7 729 aaPredicted RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 KRT40Q6A162 431 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 ZNF627Q7L945 461 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 RTN4RL1Q86UN2 441 aaPredicted RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 NBPF5PQ86XG9 351 aaPredicted RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 CLASRPQ8N2M8 674 aaKnown RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 HAS1Q92839 578 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 DEPDC7Q96QD5 511 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 TTPALQ9BTX7 342 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 GPR87Q9BY21 358 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 SNTG2Q9NY99 539 aa7.2□□□□□ -1.26
CNIH3-203ENST00000470788 HECAQ9UBI9 543 aaPredicted RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 SRP68Q9UHB9 627 aaKnown RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 NOP58Q9Y2X3 529 aaKnown RBP7.2□□□□□ -1.26
CNIH3-203ENST00000470788 TCRBV16S1A1N1A0A5B0 115 aa7.19□□□□□ -1.26
CNIH3-203ENST00000470788 GOLGA6L6A8MZA4 724 aa7.19□□□□□ -1.26
CNIH3-203ENST00000470788 B4E1Z4 1266 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms