RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 LRPAP1P30533 357 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 DSG1Q02413 1049 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 PPP2R3AQ06190 1150 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SMC1AQ14683 1233 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 KCNB1Q14721 858 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 KYAT1Q16773 422 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 KNOP1Q1ED39 458 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SPATA1Q5VX52 437 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SLFN12LQ6IEE8 588 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 PDE12Q6L8Q7 609 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 RSPO2Q6UXX9 243 aaPredicted RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 BRSK2Q8IWQ3 736 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SYCP3Q8IZU3 236 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 PLEKHO2Q8TD55 490 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 MICAL1Q8TDZ2 1067 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 HLA-CQ95604 372 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 FAM212AQ96EL1 285 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 MSLNLQ96KJ4 702 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 TIGD1Q96MW7 591 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 COLEC11Q9BWP8 271 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 TLE6Q9H808 572 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 TMEM206Q9H813 350 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 RPF1Q9H9Y2 349 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 SLC38A7Q9NVC3 462 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 CLDND1Q9NY35 253 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 HSPBP1Q9NZL4 362 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 THEGQ9P2T0 379 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 PUF60Q9UHX1 559 aaKnown RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 CDH22Q9UJ99 828 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 BARX2Q9UMQ3 279 aaPredicted RBP7.42□□□□□ -1.22
PSMD4-210ENST00000470396 EXOC7Q9UPT5 735 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 MAPK8IP1Q9UQF2 711 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 PCDHA5Q9Y5H7 936 aa7.42□□□□□ -1.22
PSMD4-210ENST00000470396 C2orf16Q68DN1 1984 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 ANO9A1A5B4 782 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 GOLGA6L4A6NEF3 574 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 C2CD2LO14523 706 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TEX28O15482 410 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 EXTL3O43909 919 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 PRPF40AO75400 957 aaKnown RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TADA2AO75478 443 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 BMP1P13497 986 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 EPCAMP16422 314 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CYP3A5P20815 502 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 FGFR3P22607 806 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TKTP29401 623 aaKnown RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 GLUD2P49448 558 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CYP2J2P51589 502 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CLCN4P51793 760 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 UBE2HP62256 183 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 POU5F1Q01860 360 aaKnown RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 PSMD2Q13200 908 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TMEM132DQ14C87 1099 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CLUL1Q15846 466 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 USP41Q3LFD5 358 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 ZCWPW2Q504Y3 356 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TJAP1Q5JTD0 557 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 FAM171A1Q5VUB5 890 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 LMBRD2Q68DH5 695 aaPredicted RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 KANK3Q6NY19 840 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 ARMCX5Q6P1M9 558 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 SYCE2Q6PIF2 218 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 DCLRE1AQ6PJP8 1040 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 PRSS55Q6UWB4 352 aaPredicted RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TMEM184AQ6ZMB5 413 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 C12orf56Q8IXR9 622 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 GPD1LQ8N335 351 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 C1orf127Q8N9H9 656 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 OR5B17Q8NGF7 314 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 LNX1Q8TBB1 728 aaPredicted RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 SLC22A17Q8WUG5 538 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 TMEM174Q8WUU8 243 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 PIK3R5Q8WYR1 880 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 DDX27Q96GQ7 796 aaKnown RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 UROC1Q96N76 676 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 KLHL5Q96PQ7 755 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 ASB2Q96Q27 587 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CDCA3Q99618 268 aaPredicted RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 CLSTN3Q9BQT9 956 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 ASB7Q9H672 318 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 RXFP1Q9HBX9 757 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 PDE11AQ9HCR9 933 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 LMBRD1Q9NUN5 540 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 DMAC2Q9NW81 257 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 RBAKQ9NYW8 714 aaPredicted RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 SIX4Q9UIU6 781 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 UBQLN1Q9UMX0 589 aaKnown RBP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 COG5Q9UP83 839 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 C2CD2Q9Y426 696 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 HCFC2Q9Y5Z7 792 aa7.41□□□□□ -1.22
PSMD4-210ENST00000470396 SF3B1O75533 1304 aaKnown RBP eCLIP7.41□□□□□ -1.22
PSMD4-210ENST00000470396 MTCL1Q9Y4B5 1905 aaKnown RBP7.4□□□□□ -1.22
PSMD4-210ENST00000470396 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 PIRO00625 290 aa7.4□□□□□ -1.22
PSMD4-210ENST00000470396 PDXKO00764 312 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms