RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 GPBP1Q86WP2 473 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 SIX5Q8N196 739 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 LRRC15Q8TF66 581 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 BLOC1S4Q9NUP1 217 aa34.21■■■■□ 3.07
HMG20B-209ENST00000470356 SYN3O14994 580 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 SRFP11831 508 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 NTHL1P78549 312 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 SF3A1Q15459 793 aaKnown RBP34.2■■■■□ 3.07
HMG20B-209ENST00000470356 VARS2Q5ST30 1063 aaKnown RBP34.2■■■■□ 3.07
HMG20B-209ENST00000470356 SLC8B1Q6J4K2 584 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 PLEKHA5Q9HAU0 1116 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 CDH7Q9ULB5 785 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 POLIQ9UNA4 740 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 NUB1Q9Y5A7 615 aa34.2■■■■□ 3.07
HMG20B-209ENST00000470356 H0Y858 1186 aa34.19■■■■□ 3.06
HMG20B-209ENST00000470356 AOC1P19801 751 aa34.19■■■■□ 3.06
HMG20B-209ENST00000470356 GRIN1Q05586 938 aa34.19■■■■□ 3.06
HMG20B-209ENST00000470356 ZNF461Q8TAF7 563 aa34.19■■■■□ 3.06
HMG20B-209ENST00000470356 ATOH1Q92858 354 aaPredicted RBP34.19■■■■□ 3.06
HMG20B-209ENST00000470356 HAPLN2Q9GZV7 340 aa34.19■■■■□ 3.06
HMG20B-209ENST00000470356 CFHP08603 1231 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 CLTAP09496 248 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 PLCG1P19174 1290 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 PDCP20941 246 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 ZNF131P52739 623 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 DHX8Q14562 1220 aaKnown RBP34.18■■■■□ 3.06
HMG20B-209ENST00000470356 BICD1Q96G01 975 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 FAM86C1Q9NVL1 165 aa34.18■■■■□ 3.06
HMG20B-209ENST00000470356 TBC1D4O60343 1298 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 ABLIM3O94929 683 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 MATR3P43243 847 aaKnown RBP eCLIP34.17■■■■□ 3.06
HMG20B-209ENST00000470356 ROR1Q01973 937 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 MRPL58Q14197 206 aaKnown RBP34.17■■■■□ 3.06
HMG20B-209ENST00000470356 MCM6Q14566 821 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 KARSQ15046 597 aaKnown RBP34.17■■■■□ 3.06
HMG20B-209ENST00000470356 MYCT1Q8N699 235 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 RAD54LQ92698 747 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 SUSD3Q96L08 255 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 PARVGQ9HBI0 331 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 TBX20Q9UMR3 447 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 NUMBLQ9Y6R0 609 aa34.17■■■■□ 3.06
HMG20B-209ENST00000470356 VPS37CA5D8V6 355 aaPredicted RBP34.16■■■■□ 3.06
HMG20B-209ENST00000470356 H7C4K7 107 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 FAM13AO94988 1023 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 CXCL8P10145 99 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 RASSF8Q8NHQ8 419 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 FGF13Q92913 245 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 RTP3Q9BQQ7 232 aa34.16■■■■□ 3.06
HMG20B-209ENST00000470356 RIF1Q5UIP0 2472 aaKnown RBP34.16■■■■□ 3.06
HMG20B-209ENST00000470356 TTC26A0AVF1 554 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 PI15O43692 258 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 PIGRP01833 764 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 LIG4P49917 911 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 KYAT1Q16773 422 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 CCSER1Q9C0I3 900 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 HCFC1R1Q9NWW0 138 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 DNMT3BQ9UBC3 853 aaKnown RBP34.15■■■■□ 3.06
HMG20B-209ENST00000470356 TUBGCP4Q9UGJ1 667 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 KCNH3Q9ULD8 1083 aa34.15■■■■□ 3.06
HMG20B-209ENST00000470356 GTF3C5Q9Y5Q8 519 aaPredicted RBP34.15■■■■□ 3.06
HMG20B-209ENST00000470356 PTPRZ1P23471 2315 aaPredicted RBP34.14■■■■□ 3.06
HMG20B-209ENST00000470356 KRBA1A5PL33 1030 aa34.14■■■■□ 3.06
HMG20B-209ENST00000470356 PABPC1LQ4VXU2 614 aaKnown RBP34.14■■■■□ 3.06
HMG20B-209ENST00000470356 ITFG1Q8TB96 612 aa34.14■■■■□ 3.06
HMG20B-209ENST00000470356 SLC2A4RGQ9NR83 387 aa34.14■■■■□ 3.06
HMG20B-209ENST00000470356 MYH15Q9Y2K3 1946 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 ARHGEF37A1IGU5 675 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 WDR27A2RRH5 827 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 K7ENM7 598 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 HNRNPDLO14979 420 aaKnown RBP34.13■■■■□ 3.05
HMG20B-209ENST00000470356 TRAK2O60296 914 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 KRT18P05783 430 aaKnown RBP34.13■■■■□ 3.05
HMG20B-209ENST00000470356 MCM4P33991 863 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 ZBTB6Q15916 424 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 FGF14Q92915 247 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 FBXL5Q9UKA1 691 aa34.13■■■■□ 3.05
HMG20B-209ENST00000470356 ATF2P15336 505 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 ELF1P32519 619 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 DDIT3P35638 169 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 PARM1Q6UWI2 310 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 MTSS1LQ765P7 747 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 TCEAL8Q8IYN2 117 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 APPL2Q8NEU8 664 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 ST13P5Q8NFI4 369 aaPredicted RBP34.12■■■■□ 3.05
HMG20B-209ENST00000470356 GPR152Q8TDT2 470 aa34.12■■■■□ 3.05
HMG20B-209ENST00000470356 LARP4BQ92615 738 aaKnown RBP34.12■■■■□ 3.05
HMG20B-209ENST00000470356 RPP25Q9BUL9 199 aaKnown RBP34.12■■■■□ 3.05
HMG20B-209ENST00000470356 FAM189A1O60320 539 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 CYP3A5P20815 502 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 LRPAP1P30533 357 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 ABCD1P33897 745 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 TNFSF9P41273 254 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 SPAG1Q07617 926 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 PTPAQ15257 358 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 CTXN3Q4LDR2 81 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 TPGS2Q68CL5 300 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 DDX12PQ92771 950 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 KIF12Q96FN5 646 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 TSPAN18Q96SJ8 248 aa34.11■■■■□ 3.05
HMG20B-209ENST00000470356 CA14Q9ULX7 337 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms