RNA–Protein interactions for RNA: ENST00000470150.5

CHRD-212, Transcript of chordin, human

TSL 2

Gene CHRD, Length 4,234 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-212	ENST00000470150	MMP3	P08254	477 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	CLTA	P09496	248 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	STAG3L1	P0CL83	205 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	FMO5	P49326	533 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	LBX1	P52954	281 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	SLC20A2	Q08357	652 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	MMTAG2	Q9BU76	263 aa	Known RBP	15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	PTCH2	Q9Y6C5	1203 aa		15.17	■□□□□ 0.02
CHRD-212	ENST00000470150	EIF3D	O15371	548 aa	Known RBP eCLIP	15.16	■□□□□ 0.02	5e-6	■□□□□ 8.9
CHRD-212	ENST00000470150	EIF3H	O15372	352 aa	Known RBP eCLIP	15.16	■□□□□ 0.02	9e-8	■■■□□ 16.6
CHRD-212	ENST00000470150	ARIH2	O95376	493 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	VIM	P08670	466 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	MUT	P22033	750 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	RBP5	P82980	135 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	KIAA0319L	Q8IZA0	1049 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	KIAA0895	Q8NCT3	520 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ZIM3	Q96PE6	472 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ADAM2	Q99965	735 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	MIS12	Q9H081	205 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	CDY2A	Q9Y6F7	541 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	CASTOR2	A6NHX0	329 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	UNCX	A6NJT0	531 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	DUSP11	O75319	330 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	HLA-DRA	P01903	254 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ALDH7A1	P49419	539 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ORC1	Q13415	861 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	EDRF1	Q3B7T1	1238 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ALKBH5	Q6P6C2	394 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	MPZL3	Q6UWV2	235 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	KCTD17	Q8N5Z5	321 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	UBL4B	Q8N7F7	174 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ZNF560	Q96MR9	790 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	GOLPH3	Q9H4A6	298 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	FAM49B	Q9NUQ9	324 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	VAV3	Q9UKW4	847 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	IGLV3-22	A0A075B6J6	115 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	KRIT1	O00522	736 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	TREH	O43280	583 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	SLC26A4	O43511	780 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	EXTL3	O43909	919 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	EZR	P15311	586 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	CASP5	P51878	434 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	SLC12A3	P55017	1021 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ALS2CL	Q60I27	953 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	PPTC7	Q8NI37	304 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	PTPN18	Q99952	460 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	C11orf70	Q9BRQ4	267 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	CYP26A1	O43174	497 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	MED7	O43513	233 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	EIF4B	P23588	611 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	KAZN	Q674X7	775 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ABHD15	Q6UXT9	468 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	SH3RF1	Q7Z6J0	888 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	ABRA	Q8N0Z2	381 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	TAB3	Q8N5C8	712 aa	Predicted RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	SEMA6B	Q9H3T3	888 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	NGRN	Q9NPE2	291 aa	Known RBP	15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	RAB20	Q9NX57	234 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150	PLAA	Q9Y263	795 aa		15.16	■□□□□ 0.02
CHRD-212	ENST00000470150		M0QYV0	167 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	PBX1	P40424	430 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	NAA25	Q14CX7	972 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	EPC2	Q52LR7	807 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	DNAJC24	Q6P3W2	148 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	C1orf186	Q6ZWK4	172 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	APTX	Q7Z2E3	356 aa	Known RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	ERICH1	Q86X53	443 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	OR2W6P	Q8NHA6	318 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	LRRC45	Q96CN5	670 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	NFASC	O94856	1347 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	ITGBL1	O95965	494 aa	Predicted RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	GLRA2	P23416	452 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	DNAJB2	P25686	324 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	PPP1R7	Q15435	360 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	PAPD7	Q5XG87	772 aa	Known RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	GPAT2	Q6NUI2	795 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	TMEM169	Q96HH4	297 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	BZW2	Q9Y6E2	419 aa	Known RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	ATP2A1	O14983	1001 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	TRAPPC3	O43617	180 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	AKAP3	O75969	853 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	GNA15	P30679	374 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	CLK2	P49760	499 aa	Known RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	AMPD2	Q01433	879 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	CACNB2	Q08289	660 aa	Predicted RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	KRT81	Q14533	505 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	GJB7	Q6PEY0	223 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	PIDD1	Q9HB75	910 aa		15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	DDX20	Q9UHI6	824 aa	Known RBP	15.15	■□□□□ 0.02
CHRD-212	ENST00000470150	IFNB1	P01574	187 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	RPSA	P08865	295 aa	Known RBP	15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	WDR59	Q6PJI9	974 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	RNF139	Q8WU17	664 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	UBXN6	Q9BZV1	441 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	IKZF4	Q9H2S9	585 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	NOVA2	Q9UNW9	492 aa	Known RBP	15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	SCN7A	Q01118	1682 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	ZNF862	O60290	1169 aa		15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	NOP14	P78316	857 aa	Known RBP	15.14	■□□□□ 0.01
CHRD-212	ENST00000470150	SP2	Q02086	613 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms