RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 MYBPHLA2RUH7 354 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 C4orf47A7E2U8 309 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 HEPACAM2A8MVW5 462 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 SPECC1L-ADORA2AF8WAN1 911 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 TMEM189-UBE2V1I3L0A0 370 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 CHADO15335 359 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 EXTL3O43909 919 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 P4HBP07237 508 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 CCDC192P0DO97 292 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 YWHABP31946 246 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 ELF1P32519 619 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 CTHP32929 405 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 SOX9P48436 509 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 RBM25P49756 843 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 EXOSC10Q01780 885 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 ROR1Q01973 937 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 CYP4A22Q5TCH4 519 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 C4orf19Q8IY42 314 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 TCEAL8Q8IYN2 117 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 E2F7Q96AV8 911 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 C22orf23Q9BZE7 217 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 XPNPEP1Q9NQW7 623 aa13.29□□□□□ -0.28
LSM2-209ENST00000470083 TDRD15B5MCY1 1934 aaKnown RBP13.29□□□□□ -0.28
LSM2-209ENST00000470083 PRPF3O43395 683 aaKnown RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 MOSPD3O75425 235 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 B3GAT3O94766 335 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 ABLIM3O94929 683 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 ATF2P15336 505 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 CSRP1P21291 193 aaKnown RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 PXNP49023 591 aaPredicted RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 FCHO2Q0JRZ9 810 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 CAPSQ13938 189 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 PLK5Q496M5 336 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 MOXD1Q6UVY6 613 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 DHX32Q7L7V1 743 aaKnown RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 YAF2Q8IY57 180 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 LEMD2Q8NC56 503 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 FAM200AQ8TCP9 573 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 LXNQ9BS40 222 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 NEUROG3Q9Y4Z2 214 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 INSL5Q9Y5Q6 135 aa13.28□□□□□ -0.28
LSM2-209ENST00000470083 HELZ2Q9BYK8 2649 aaKnown RBP13.28□□□□□ -0.28
LSM2-209ENST00000470083 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 RECQL4O94761 1208 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 EPHA5P54756 1037 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 SOWAHCQ53LP3 525 aaPredicted RBP13.27□□□□□ -0.29
LSM2-209ENST00000470083 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 IQCEQ6IPM2 695 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 ELMOD1Q8N336 334 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 RSPRY1Q96DX4 576 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 CYP4F11Q9HBI6 524 aa13.27□□□□□ -0.29
LSM2-209ENST00000470083 TRAPPC3O43617 180 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 CAVIN2O95810 425 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 IGFBP6P24592 240 aaPredicted RBP13.26□□□□□ -0.29
LSM2-209ENST00000470083 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
LSM2-209ENST00000470083 PON2Q15165 354 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 ELF2Q15723 593 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 SPAG17Q6Q759 2223 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 TICRRQ7Z2Z1 1910 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 GPR88Q9GZN0 384 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 CXCL16Q9H2A7 254 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 ASAH2Q9NR71 780 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 SNTG2Q9NY99 539 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
LSM2-209ENST00000470083 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
LSM2-209ENST00000470083 MSRB2Q9Y3D2 182 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 BPTFQ12830 3046 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 MAST4O15021 2626 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
LSM2-209ENST00000470083 BCLAF3A2AJT9 711 aaKnown RBP13.25□□□□□ -0.29
LSM2-209ENST00000470083 SEC24AO95486 1093 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 GJA1P17302 382 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 GLRA2P23416 452 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 ARL2P36404 184 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 CREB5Q02930 508 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 TEAD2Q15562 447 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 RNF20Q5VTR2 975 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 PKN3Q6P5Z2 889 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 CD300LGQ6UXG3 332 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 ZNF512Q96ME7 567 aaPredicted RBP13.25□□□□□ -0.29
LSM2-209ENST00000470083 FAM20AQ96MK3 541 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 DUSP15Q9H1R2 295 aaPredicted RBP13.25□□□□□ -0.29
LSM2-209ENST00000470083 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
LSM2-209ENST00000470083 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
LSM2-209ENST00000470083 TMEM9BQ9NQ34 198 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms