RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 TRPC3Q13507 836 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 SNX17Q15036 470 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 H2AFVQ71UI9 128 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 RNF10Q8N5U6 811 aaKnown RBP19.49■□□□□ 0.71
SMC4-211ENST00000469858 GTF2IRD1Q9UHL9 959 aa19.49■□□□□ 0.71
SMC4-211ENST00000469858 CTIFO43310 598 aaKnown RBP19.48■□□□□ 0.71
SMC4-211ENST00000469858 ASS1P00966 412 aaKnown RBP19.48■□□□□ 0.71
SMC4-211ENST00000469858 ASGR1P07306 291 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 DCAF4L1Q3SXM0 396 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 JADE1Q6IE81 842 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 LRRN4CLQ8ND94 238 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 TAS2R14Q9NYV8 317 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 TBXAS1P24557 533 aaPredicted RBP19.48■□□□□ 0.71
SMC4-211ENST00000469858 GALCP54803 685 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 PCBP1Q15365 356 aaKnown RBP eCLIP19.48■□□□□ 0.713e-12■■■■□ 20.8
SMC4-211ENST00000469858 KCNA10Q16322 511 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 SLC10A6Q3KNW5 377 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 TAF2Q6P1X5 1199 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 NOTUMQ6P988 496 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 NME8Q8N427 588 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 ACAP3Q96P50 834 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 CARD6Q9BX69 1037 aa19.48■□□□□ 0.71
SMC4-211ENST00000469858 ATP8B3O60423 1300 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 MROH7Q68CQ1 1323 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 MMEP08473 750 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 CHRNB2P17787 502 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 GDF6Q6KF10 455 aaPredicted RBP19.47■□□□□ 0.71
SMC4-211ENST00000469858 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
SMC4-211ENST00000469858 MNS1Q8NEH6 495 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 ASB7Q9H672 318 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 CDC23Q9UJX2 597 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 INTUQ9ULD6 942 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 HTTP42858 3142 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 RALGAPA2Q2PPJ7 1873 aa19.47■□□□□ 0.71
SMC4-211ENST00000469858 ANO9A1A5B4 782 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 BTNL10A8MVZ5 291 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 CALCAP01258 141 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 KRT19P08727 400 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 ABCB4P21439 1286 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 GRM5P41594 1212 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 CRYBB1P53674 252 aaPredicted RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 AMPD2Q01433 879 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 POU5F1Q01860 360 aaKnown RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 SGSM1Q2NKQ1 1148 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 ZNF699Q32M78 642 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 MAP3K21Q5TCX8 1036 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 KLHDC9Q8NEP7 349 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 ERO1AQ96HE7 468 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 EIF2AQ9BY44 585 aaKnown RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 PCDHB4Q9Y5E5 795 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 DYNC1I1O14576 645 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 ACO1P21399 889 aaKnown RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 FMO1Q01740 532 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 TMEM130Q8N3G9 435 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 PCDHB18PQ96TA0 734 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 DDX20Q9UHI6 824 aaKnown RBP19.46■□□□□ 0.71
SMC4-211ENST00000469858 JRKLQ9Y4A0 524 aa19.46■□□□□ 0.71
SMC4-211ENST00000469858 NOP2P46087 812 aaKnown RBP19.45■□□□□ 0.7
SMC4-211ENST00000469858 CDR2Q01850 454 aa19.45■□□□□ 0.7
SMC4-211ENST00000469858 TMEM132DQ14C87 1099 aa19.45■□□□□ 0.7
SMC4-211ENST00000469858 PAPD7Q5XG87 772 aaKnown RBP19.45■□□□□ 0.7
SMC4-211ENST00000469858 TMEM270Q6UE05 265 aa19.45■□□□□ 0.7
SMC4-211ENST00000469858 C1orf127Q8N9H9 656 aa19.45■□□□□ 0.7
SMC4-211ENST00000469858 CTNNBL1Q8WYA6 563 aaPredicted RBP19.45■□□□□ 0.7
SMC4-211ENST00000469858 TRIM6Q9C030 488 aaPredicted RBP19.45■□□□□ 0.7
SMC4-211ENST00000469858 NIF3L1Q9GZT8 377 aa19.45■□□□□ 0.7
SMC4-211ENST00000469858 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.45■□□□□ 0.77e-44■■■■■ 137.4
SMC4-211ENST00000469858 V9GYY5 206 aaPredicted RBP19.45■□□□□ 0.7
SMC4-211ENST00000469858 PALMO75781 387 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 TFRCP02786 760 aaKnown RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 ITGB3P05106 788 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 CST5P28325 142 aaPredicted RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 AXLP30530 894 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 TUBB2AQ13885 445 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 NAA30Q147X3 362 aaPredicted RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 CCSAPQ6IQ19 270 aaPredicted RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 ZNF710Q8N1W2 664 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 DDX1Q92499 740 aaKnown RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 TUBB2BQ9BVA1 445 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 CELF4Q9BZC1 486 aaKnown RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 XYLT2Q9H1B5 865 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 SNTG2Q9NY99 539 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 SIX4Q9UIU6 781 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 HES2Q9Y543 173 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 SAR1BQ9Y6B6 198 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 M0QZ92 97 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 GNRH1P01148 92 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 TMEM253P0C7T8 217 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 MRPS6P82932 125 aaKnown RBP19.44■□□□□ 0.7
SMC4-211ENST00000469858 SCARA5Q6ZMJ2 495 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 PXYLP1Q8TE99 480 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 WNT8BQ93098 351 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 PCDHB2Q9Y5E7 798 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 PCDHGC5Q9Y5F6 944 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 CDY2AQ9Y6F7 541 aa19.44■□□□□ 0.7
SMC4-211ENST00000469858 FKTNO75072 461 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms