RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SHC3Q92529 594 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 DCPSQ96C86 337 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 INO80BQ9C086 356 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 NXF1Q9UBU9 619 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TMEM59LQ9UK28 342 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PHIPQ8WWQ0 1821 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 C19orf81C9J6K1 198 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 B4GALT5O43286 388 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 NEBLO76041 1014 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 ZBTB48P10074 688 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 FGFR4P22455 802 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 MAPK4P31152 587 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 IRAK1P51617 712 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 NFIL3Q16649 462 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 GLE1Q53GS7 698 aaKnown RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 HP1BP3Q5SSJ5 553 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 SPIRE2Q8WWL2 714 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 N4BP2L2Q92802 583 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 HAUS1Q96CS2 278 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 APOBEC3GQ9HC16 384 aaKnown RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 DAAM1Q9Y4D1 1078 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 LAMA2P24043 3122 aaKnown RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 SYNGAP1Q96PV0 1343 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 LTBP3Q9NS15 1303 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 GSTTP1A0A1W2PQM5 241 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 KIF3CO14782 793 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 THAP12O43422 761 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 CLCN3P51790 818 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 ALCAMQ13740 583 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 KRT71Q3SY84 523 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 IQCKQ8N0W5 287 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 PCYT2Q99447 389 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 ADAM33Q9BZ11 813 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 MTMR12Q9C0I1 747 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 SPATC1LQ9H0A9 340 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 ISCUQ9H1K1 167 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 MCM8Q9UJA3 840 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 NOVA2Q9UNW9 492 aaKnown RBP10.07□□□□□ -0.8
TOP3A-203ENST00000469739 NUB1Q9Y5A7 615 aa10.07□□□□□ -0.8
TOP3A-203ENST00000469739 GOLGA6L10A0A0M3HER8 536 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 SHBGP04278 402 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CDR2Q01850 454 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 PPFIA1Q13136 1202 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CAPSQ13938 189 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC137Q6PK04 289 aaKnown RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 UBL4BQ8N7F7 174 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 PRELID2Q8N945 189 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC114Q96M63 670 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ZSWIM1Q9BR11 485 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 HERPUD2Q9BSE4 406 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ZNF112Q9UJU3 913 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 A0A0A6YYK5 440 aaPredicted RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 BTNL10A8MVZ5 291 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 MYO1FO00160 1098 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CHUKO15111 745 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 TCF4P15884 667 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 BIRC2Q13490 618 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC38Q502W7 563 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 SEL1L2Q5TEA6 688 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CRELD2Q6UXH1 353 aaPredicted RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 JAMLQ86YT9 394 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 RHOT2Q8IXI1 618 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 MDM1Q8TC05 714 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ATP8B4Q8TF62 1192 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ASCC2Q9H1I8 757 aaPredicted RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 AZI2Q9H6S1 392 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CD248Q9HCU0 757 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ARHGAP28Q9P2N2 729 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 RLFQ13129 1914 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 VNN1O95497 513 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 RARAP10276 462 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 IBSPP21815 317 aaPredicted RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
TOP3A-203ENST00000469739 RAP1GAPP47736 663 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 PPP1R7Q15435 360 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 TMEM192Q8IY95 271 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 CAVIN3Q969G5 261 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 FMO2Q99518 471 aa10.06□□□□□ -0.8
TOP3A-203ENST00000469739 NCANO14594 1321 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 MCM3APO60318 1980 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.05□□□□□ -0.8
TOP3A-203ENST00000469739 GNA15P30679 374 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 TMEM62Q0P6H9 643 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 B4GALNT4Q76KP1 1039 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CDHR1Q96JP9 859 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 MFSD14AQ96MC6 490 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 FHDC1Q9C0D6 1143 aaPredicted RBP10.05□□□□□ -0.8
TOP3A-203ENST00000469739 CHST7Q9NS84 486 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 INTUQ9ULD6 942 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 DICER1Q9UPY3 1922 aaKnown RBP10.05□□□□□ -0.8
TOP3A-203ENST00000469739 EXTL3O43909 919 aa10.05□□□□□ -0.8
TOP3A-203ENST00000469739 ATP2C2O75185 946 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms