RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 GJA9P57773 515 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 TFAMQ00059 246 aaKnown RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 SGSM1Q2NKQ1 1148 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 ERCC6LQ2NKX8 1250 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF699Q32M78 642 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 PRAMEF19Q5SWL8 479 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 MEI1Q5TIA1 1274 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 CATSPER4Q7RTX7 472 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF572Q7Z3I7 529 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 NOP9Q86U38 636 aaKnown RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 KIAA0319LQ8IZA0 1049 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 OR5B17Q8NGF7 314 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 TPCN2Q8NHX9 752 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 SLC20A1Q8WUM9 679 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 KAT2BQ92831 832 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 TATDN2Q93075 761 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 OSBPL9Q96SU4 736 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 PI4K2AQ9BTU6 479 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 CCDC94Q9BW85 323 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 MTMR12Q9C0I1 747 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 UPF3AQ9H1J1 476 aaKnown RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 PUF60Q9UHX1 559 aaKnown RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 SALL4Q9UJQ4 1053 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 V9GYY5 206 aaPredicted RBP10.02□□□□□ -0.81
SMC1A-205ENST00000469129 MROH7Q68CQ1 1323 aa10.02□□□□□ -0.81
SMC1A-205ENST00000469129 A0A1B0GUA9 196 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TMCO5BA8MYB1 307 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 M0QZ92 97 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-205ENST00000469129 SGPL1O95470 568 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 CXCL8P10145 99 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 P4HA1P13674 534 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ABCB4P21439 1286 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ATICP31939 592 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 GRM5P41594 1212 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 WNT7BP56706 349 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 GPC5P78333 572 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 FMO1Q01740 532 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 CLUL1Q15846 466 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 CFAP221Q4G0U5 840 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 SEZ6Q53EL9 994 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TAF3Q5VWG9 929 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 C11orf63Q6NUN7 778 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TAF2Q6P1X5 1199 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 PEX26Q7Z412 305 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 SLC47A2Q86VL8 602 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 NME8Q8N427 588 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TTC39CQ8N584 583 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 C7orf31Q8N865 590 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TSC1Q92574 1164 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 RUBCNQ92622 972 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ZBTB10Q96DT7 871 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF668Q96K58 619 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-205ENST00000469129 PBKQ96KB5 322 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ACAP3Q96P50 834 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TSPAN18Q96SJ8 248 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 PPP1R16BQ96T49 567 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 MTG1Q9BT17 334 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TLR10Q9BXR5 811 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 CFHR5Q9BXR6 569 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 FAM49AQ9H0Q0 323 aaPredicted RBP10.01□□□□□ -0.81
SMC1A-205ENST00000469129 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 HDAC6Q9UBN7 1215 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 GTF3C4Q9UKN8 822 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 ITGA11Q9UKX5 1188 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 CNTN6Q9UQ52 1028 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 DERAQ9Y315 318 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 C2CD2Q9Y426 696 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
SMC1A-205ENST00000469129 TDRD15B5MCY1 1934 aaKnown RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 SEPT4O43236 478 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 ERLIN1O75477 346 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 MTA2O94776 668 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 KIF4AO95239 1232 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 TBC1D8O95759 1140 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 FTCDO95954 541 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 MMEP08473 750 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 C6orf222P0C671 652 aaPredicted RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 RARBP10826 455 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 DARSP14868 501 aaKnown RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 CHRNB2P17787 502 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 HOXD10P28358 340 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 GNA15P30679 374 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 HOXC8P31273 242 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 OSTNP61366 133 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 NKX3-2P78367 333 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 ADAM17P78536 824 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 PURAQ00577 322 aaKnown RBP10□□□□□ -0.81
SMC1A-205ENST00000469129 TMEM132DQ14C87 1099 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 RPS6KA1Q15418 735 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 CLEC16AQ2KHT3 1053 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 KIZQ2M2Z5 673 aa10□□□□□ -0.81
SMC1A-205ENST00000469129 ZNF667Q5HYK9 610 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms