RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 PLEKHG4Q58EX7 1191 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 SPOPLQ6IQ16 392 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 PDXDC1Q6P996 788 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 AGMOQ6ZNB7 445 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 UBE2Q1Q7Z7E8 422 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 NT5DC4Q86YG4 428 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 GSTCDQ8NEC7 633 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 TET1Q8NFU7 2136 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 HELQQ8TDG4 1101 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 KAT5Q92993 513 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 ZFP42Q96MM3 310 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 APOBEC3GQ9HC16 384 aaKnown RBP13.83□□□□□ -0.19
RUNX1-213ENST00000469087 DERAQ9Y315 318 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 C9IYK1 514 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 ZC3H11AO75152 810 aaKnown RBP eCLIP13.83□□□□□ -0.2
RUNX1-213ENST00000469087 KCNE1P15382 129 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 FECHP22830 423 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 HNRNPH3P31942 346 aaKnown RBP13.83□□□□□ -0.2
RUNX1-213ENST00000469087 RAB27AP51159 221 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 AFF1P51825 1210 aaKnown RBP13.83□□□□□ -0.2
RUNX1-213ENST00000469087 JAM2P57087 298 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 DRAP1Q14919 205 aaPredicted RBP13.83□□□□□ -0.2
RUNX1-213ENST00000469087 TCTN1Q2MV58 587 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 WDR44Q5JSH3 913 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 GPIHBP1Q8IV16 184 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 PPM1KQ8N3J5 372 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
RUNX1-213ENST00000469087 NT5C1BQ96P26 610 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 CHP1Q99653 195 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 STK33Q9BYT3 514 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 GPR88Q9GZN0 384 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 DPP3Q9NY33 737 aa13.83□□□□□ -0.2
RUNX1-213ENST00000469087 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 TRIM43BA6NCK2 446 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 PTGESO14684 152 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 ITGB3P05106 788 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 KRT19P08727 400 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 PNMA6AP0CW24 399 aaPredicted RBP13.82□□□□□ -0.2
RUNX1-213ENST00000469087 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
RUNX1-213ENST00000469087 ITGB8P26012 769 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 FAM189BP81408 668 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 TRPC3Q13507 836 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 MEA1Q16626 185 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 ARHGAP44Q17R89 818 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 SGSM1Q2NKQ1 1148 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 TSR1Q2NL82 804 aaKnown RBP13.82□□□□□ -0.2
RUNX1-213ENST00000469087 SLC24A5Q71RS6 500 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
RUNX1-213ENST00000469087 ECHDC2Q86YB7 292 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 TRIM43Q96BQ3 446 aaPredicted RBP13.82□□□□□ -0.2
RUNX1-213ENST00000469087 KREMEN1Q96MU8 473 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 GAD1Q99259 594 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 FTHL17Q9BXU8 183 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 XYLT2Q9H1B5 865 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 MIOSQ9NXC5 875 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 AIPL1Q9NZN9 384 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
RUNX1-213ENST00000469087 PDCD11Q14690 1871 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 FOXN3O00409 490 aaPredicted RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ENPP3O14638 875 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ASS1P00966 412 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 CXCL10P02778 98 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SKIP12755 728 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 MLH1P40692 756 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 HACE1Q8IYU2 909 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 RNF169Q8NCN4 708 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SEPT8Q92599 483 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SYN2Q92777 582 aaPredicted RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 TUBGCP4Q9UGJ1 667 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 DAAM1Q9Y4D1 1078 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ARL5CA6NH57 179 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SOWAHDA6NJG2 315 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 RFX1P22670 979 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 MFAP3P55082 362 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 NOP14P78316 857 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 GCNT1Q02742 428 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 SOX4Q06945 474 aaPredicted RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 IRF2BP2Q7Z5L9 587 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 DEFB128Q7Z7B8 93 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 VWCEQ96DN2 955 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 TSPAN18Q96SJ8 248 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ARID3AQ99856 593 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 PCDH10Q9P2E7 1040 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ITGA11Q9UKX5 1188 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 MYO6Q9UM54 1294 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 UBQLN1Q9UMX0 589 aaKnown RBP13.81□□□□□ -0.2
RUNX1-213ENST00000469087 AGAP1Q9UPQ3 857 aa13.81□□□□□ -0.2
RUNX1-213ENST00000469087 ZKSCAN5Q9Y2L8 839 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms