RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 PLXNA4Q9HCM2 1894 aa20.65■□□□□ 0.9
PCCB-208ENST00000468777 NRP1O14786 923 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 CLCNKBP51801 687 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 TFAMQ00059 246 aaKnown RBP20.64■□□□□ 0.9
PCCB-208ENST00000468777 POU5F1Q01860 360 aaKnown RBP20.64■□□□□ 0.9
PCCB-208ENST00000468777 ZBTB6Q15916 424 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 CT47A1Q5JQC4 288 aaPredicted RBP20.64■□□□□ 0.9
PCCB-208ENST00000468777 CD302Q8IX05 232 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 ZC3H3Q8IXZ2 948 aaKnown RBP20.64■□□□□ 0.9
PCCB-208ENST00000468777 FAM186BQ8IYM0 893 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 CSGALNACT2Q8N6G5 542 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 KLHL23Q8NBE8 558 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 HASPINQ8TF76 798 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 BCL7CQ8WUZ0 217 aaPredicted RBP20.64■□□□□ 0.9
PCCB-208ENST00000468777 MFSD14AQ96MC6 490 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 PCDHB12Q9Y5F1 795 aa20.64■□□□□ 0.9
PCCB-208ENST00000468777 PRUNE2Q8WUY3 3088 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 RFXAPO00287 272 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 CSPG5O95196 566 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 FXR1P51114 621 aaKnown RBP eCLIP20.64■□□□□ 0.89
PCCB-208ENST00000468777 DLG4P78352 724 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 Q7L0L9 218 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 AAASQ9NRG9 546 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 SLC38A7Q9NVC3 462 aa20.64■□□□□ 0.89
PCCB-208ENST00000468777 ALDH2P05091 517 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 ITGB1P05556 798 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 ERCC5P28715 1186 aaPredicted RBP20.63■□□□□ 0.89
PCCB-208ENST00000468777 PSMC2P35998 433 aaKnown RBP20.63■□□□□ 0.89
PCCB-208ENST00000468777 PSMD6Q15008 389 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 ZNF697Q5TEC3 545 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 SCARA3Q6AZY7 606 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 FBXO22Q8NEZ5 403 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 OR5B17Q8NGF7 314 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 FNBP1Q96RU3 617 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 MTMR12Q9C0I1 747 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 ALG13Q9NP73 1137 aaKnown RBP20.63■□□□□ 0.89
PCCB-208ENST00000468777 UBQLN1Q9UMX0 589 aaKnown RBP20.63■□□□□ 0.89
PCCB-208ENST00000468777 FAN1Q9Y2M0 1017 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 C2CD2Q9Y426 696 aa20.63■□□□□ 0.89
PCCB-208ENST00000468777 TNNI1P19237 187 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 C3orf58Q8NDZ4 430 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 PARD3BQ8TEW8 1205 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 GDPD5Q8WTR4 605 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 TMEM175Q9BSA9 504 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 SRRTQ9BXP5 876 aaKnown RBP20.62■□□□□ 0.89
PCCB-208ENST00000468777 MARCH5Q9NX47 278 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 RWDD3Q9Y3V2 267 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 COL4A4P53420 1690 aaPredicted RBP20.62■□□□□ 0.89
PCCB-208ENST00000468777 XIRP2A4UGR9 3374 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 LRRIQ3A6PVS8 624 aaPredicted RBP20.62■□□□□ 0.89
PCCB-208ENST00000468777 KIF4AO95239 1232 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 EPB41P11171 864 aaKnown RBP20.62■□□□□ 0.89
PCCB-208ENST00000468777 GRIN2CQ14957 1233 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 UPP1Q16831 310 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 SPATA1Q5VX52 437 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 SLC39A11Q8N1S5 342 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 DERAQ9Y315 318 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 MYO7AQ13402 2215 aa20.62■□□□□ 0.89
PCCB-208ENST00000468777 C5orf67F2Z3F1 127 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 PPEF2O14830 753 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 FGF18O76093 207 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 TRIM49P0CI25 452 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 TRIM49CP0CI26 452 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 ZNF75DP51815 510 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 BEST2Q8NFU1 509 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 ENOX1Q8TC92 643 aaKnown RBP20.61■□□□□ 0.89
PCCB-208ENST00000468777 IGSF21Q96ID5 467 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 PRDM12Q9H4Q4 367 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 DPP3Q9NY33 737 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 SCN1AP35498 2009 aa20.61■□□□□ 0.89
PCCB-208ENST00000468777 PODXLO00592 558 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 B3GAT3O94766 335 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 PTMAP06454 111 aaKnown RBP20.6■□□□□ 0.89
PCCB-208ENST00000468777 TMEM191BP0C7N4 346 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 BFSP1Q12934 665 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 HSP90AA2PQ14568 343 aaPredicted RBP20.6■□□□□ 0.89
PCCB-208ENST00000468777 HS1BP3Q53T59 392 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 HSP90AA4PQ58FG1 418 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 FOXR2Q6PJQ5 311 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 WDR49Q8IV35 697 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 ZNF516Q92618 1163 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 BORCS6Q96GS4 357 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 SAMD11Q96NU1 681 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 CGRRF1Q99675 332 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 MKNK1Q9BUB5 465 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 PLVAPQ9BX97 442 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 INTS13Q9NVM9 706 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 SPG21Q9NZD8 308 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 COL6A3P12111 3177 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 MAPK13O15264 365 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 SLC16A3O15427 465 aaKnown RBP20.6■□□□□ 0.89
PCCB-208ENST00000468777 XPOTO43592 962 aaKnown RBP20.6■□□□□ 0.89
PCCB-208ENST00000468777 VAMP7P51809 220 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 GPM6BQ13491 265 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 SURF1Q15526 300 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 C1orf220Q5T0J3 134 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 INTS8Q75QN2 995 aaKnown RBP20.6■□□□□ 0.89
PCCB-208ENST00000468777 C1orf127Q8N9H9 656 aa20.6■□□□□ 0.89
PCCB-208ENST00000468777 TMEM169Q96HH4 297 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms