RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 GREM2Q9H772 168 aa4.77□□□□□ -1.65
SSB-208ENST00000468600 RBM12Q9NTZ6 932 aaKnown RBP4.77□□□□□ -1.65
SSB-208ENST00000468600 MOCS1Q9NZB8 636 aa4.77□□□□□ -1.65
SSB-208ENST00000468600 ADSLP30566 484 aaPredicted RBP4.76□□□□□ -1.65
SSB-208ENST00000468600 ID4P47928 161 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 CDK17Q00537 523 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 UBXN2BQ14CS0 331 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 GPR162Q16538 588 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 SRSF7Q16629 238 aaKnown RBP eCLIP4.76□□□□□ -1.65
SSB-208ENST00000468600 MUM1L1Q5H9M0 696 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 AFMIDQ63HM1 303 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 CASKIN2Q8WXE0 1202 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 MRI1Q9BV20 369 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 KCTD5Q9NXV2 234 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 KCNE5Q9UJ90 142 aa4.76□□□□□ -1.65
SSB-208ENST00000468600 CACNA1IQ9P0X4 2223 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 POMCP01189 267 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 RAP2BP61225 183 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 PPP3CAQ08209 521 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 FAPQ12884 760 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 TAF7LQ5H9L4 462 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 FOXR2Q6PJQ5 311 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 PTCD3Q96EY7 689 aaKnown RBP4.75□□□□□ -1.65
SSB-208ENST00000468600 IFT122Q9HBG6 1241 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 IL17RBQ9NRM6 502 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 LANCL2Q9NS86 450 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 EDARQ9UNE0 448 aa4.75□□□□□ -1.65
SSB-208ENST00000468600 TEX33O43247 280 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 GPANK1O95872 356 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 ATP5JP18859 108 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 GPD1P21695 349 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 FGFR4P22455 802 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 SEM1Q6ZVN7 128 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 COLGALT2Q8IYK4 626 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 PQLC1Q8N2U9 271 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 LNX2Q8N448 690 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 PDPRQ8NCN5 879 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 HASPINQ8TF76 798 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 CYFIP2Q96F07 1278 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 SIK3Q9Y2K2 1263 aa4.74□□□□□ -1.65
SSB-208ENST00000468600 MTO1Q9Y2Z2 717 aaKnown RBP4.74□□□□□ -1.65
SSB-208ENST00000468600 PEX1O43933 1283 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 BRINP1O60477 761 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 ENDOD1O94919 500 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 MCAMP43121 646 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 GYS2P54840 703 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 HSD11B2P80365 405 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 MALLQ13021 153 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 CYP2A13Q16696 494 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 NACC2Q96BF6 587 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 SARAFQ96BY9 339 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 UHRF1Q96T88 793 aaPredicted RBP4.73□□□□□ -1.65
SSB-208ENST00000468600 ACE2Q9BYF1 805 aaPredicted RBP4.73□□□□□ -1.65
SSB-208ENST00000468600 CPNE5Q9HCH3 593 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 SLC23A1Q9UHI7 598 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 ENTPD2Q9Y5L3 495 aa4.73□□□□□ -1.65
SSB-208ENST00000468600 MANSC4A6NHS7 340 aaPredicted RBP4.72□□□□□ -1.65
SSB-208ENST00000468600 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 ERN1O75460 977 aaKnown RBP4.72□□□□□ -1.65
SSB-208ENST00000468600 BMP15O95972 392 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 CELA2AP08217 269 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 CKBP12277 381 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 ALDH1A3P47895 512 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 VAV2P52735 878 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 PER3P56645 1201 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 MGAT2Q10469 447 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 STRN3Q13033 797 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 CMIPQ8IY22 773 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.72□□□□□ -1.65
SSB-208ENST00000468600 DDB2Q92466 427 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 SENP6Q9GZR1 1112 aaPredicted RBP4.72□□□□□ -1.65
SSB-208ENST00000468600 CAAP1Q9H8G2 361 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 UNKLQ9H9P5 680 aaKnown RBP4.72□□□□□ -1.65
SSB-208ENST00000468600 TMEM140Q9NV12 185 aa4.72□□□□□ -1.65
SSB-208ENST00000468600 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 CCDC151A5D8V7 595 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 WIPF3A6NGB9 483 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 KCNAB3O43448 404 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 RAP2AP10114 183 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 PTGER1P34995 402 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 SLC5A3P53794 718 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 STRA8Q7Z7C7 330 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 NOP9Q86U38 636 aaKnown RBP4.71□□□□□ -1.66
SSB-208ENST00000468600 NUP133Q8WUM0 1156 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 MED15Q96RN5 788 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 TIMP4Q99727 224 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 QRSL1Q9H0R6 528 aaKnown RBP4.71□□□□□ -1.66
SSB-208ENST00000468600 FBXO34Q9NWN3 711 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 AJAP1Q9UKB5 411 aaPredicted RBP4.71□□□□□ -1.66
SSB-208ENST00000468600 TBX22Q9Y458 520 aa4.71□□□□□ -1.66
SSB-208ENST00000468600 AATKQ6ZMQ8 1374 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 PRSS23O95084 383 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 PRKCGP05129 697 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 ALAS1P13196 640 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 WT1P19544 449 aaPredicted RBP4.7□□□□□ -1.66
SSB-208ENST00000468600 SLC6A2P23975 617 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 SOX5P35711 763 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 SLC6A9P48067 706 aa4.7□□□□□ -1.66
SSB-208ENST00000468600 CCT2P78371 535 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms