RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 KRT85P78386 507 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CHRNEQ04844 493 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 BAATQ14032 418 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 NONOQ15233 471 aaKnown RBP eCLIP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 NPY5RQ15761 445 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 LONRF2Q1L5Z9 754 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 LETM2Q2VYF4 491 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 C2orf27AQ580R0 203 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TTC38Q5R3I4 469 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 ANO1Q5XXA6 986 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GALNT17Q6IS24 598 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 ZPBP2Q6X784 338 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 LBX2Q6XYB7 198 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 RNF207Q6ZRF8 634 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CBLL1Q75N03 491 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 BRAPQ7Z569 592 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 ANKRD35Q8N283 1001 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 OXR1Q8N573 874 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 JMYQ8N9B5 988 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 REPS2Q8NFH8 660 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GPRC5AQ8NFJ5 357 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TBCKQ8TEA7 893 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CLEC4DQ8WXI8 215 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 COPS5Q92905 334 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CAPNS2Q96L46 248 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CCDC140Q96MF4 163 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 PTCHD1Q96NR3 888 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TAAR1Q96RJ0 339 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 USP28Q96RU2 1077 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 PARK7Q99497 189 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 MOV10L1Q9BXT6 1211 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TEX13BQ9BXU2 312 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 ANO3Q9BYT9 981 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 SPATC1LQ9H0A9 340 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 GLT8D2Q9H1C3 349 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 R3HDMLQ9H3Y0 253 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TXNRD2Q9NNW7 524 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 C19orf73Q9NVV2 129 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 RTEL1Q9NZ71 1219 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TNFRSF10DQ9UBN6 386 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CFAP45Q9UL16 551 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 ADAMTS5Q9UNA0 930 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 CTNND2Q9UQB3 1225 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 RABGAP1Q9Y3P9 1069 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 PCDHB6Q9Y5E3 794 aa4.61□□□□□ -1.67
TMEM39A-204ENST00000468545 TRBV23OR9-2A0A075B6M9 112 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ESYT2A0FGR8 921 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 FITM1A5D6W6 292 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MEIS2O14770 477 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 PAX4O43316 350 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 TBC1D8O95759 1140 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 CPP00450 1065 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 RAC2P15153 192 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 GRIA2P42262 883 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ME1P48163 572 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 TOB1P50616 345 aaPredicted RBP4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 HK2P52789 917 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 OAZ1P54368 228 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 INHBEP58166 350 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 RPS6P62753 249 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 SREBF2Q12772 1141 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MAP4K2Q12851 820 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 TKFCQ3LXA3 575 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 RILPL1Q5EBL4 403 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ZC3H12BQ5HYM0 836 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ARHGEF16Q5VV41 709 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 SLC30A10Q6XR72 485 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 NEK8Q86SG6 692 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 RIOX2Q8IUF8 465 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 KRTAP1-3Q8IUG1 177 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MB21D1Q8N884 522 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 CHST13Q8NET6 341 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 THAP3Q8WTV1 239 aaPredicted RBP4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 KCTD13Q8WZ19 329 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 HHIPL1Q96JK4 782 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MMP19Q99542 508 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 IER2Q9BTL4 223 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ACAD9Q9H845 621 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 EBF1Q9UH73 591 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 ADGRE2Q9UHX3 823 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 PNMA2Q9UL42 364 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MYPNQ86TC9 1320 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 PHIPQ8WWQ0 1821 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 TRPM7Q96QT4 1865 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 MYH6P13533 1939 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 OTOFQ9HC10 1997 aa4.6□□□□□ -1.67
TMEM39A-204ENST00000468545 RASSF10A6NK89 507 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 FADS2P1A8MWK0 482 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 ATP2A1O14983 1001 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 SPTLC2O15270 562 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 TDP2O95551 362 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 SLC25A27O95847 323 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 FOSP01100 380 aaPredicted RBP4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 HPXP02790 462 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 THBDP07204 575 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 PGK2P07205 417 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 PABPC1P11940 636 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 FCER1AP12319 257 aa4.59□□□□□ -1.67
TMEM39A-204ENST00000468545 TXKP42681 527 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms