RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 CCDC39Q9UFE4 941 aa4.38□□□□□ -1.71
HMGB1P25-201ENST00000468402 Q9UFV3 132 aa4.38□□□□□ -1.71
HMGB1P25-201ENST00000468402 SRRDQ9UH36 339 aa4.38□□□□□ -1.71
HMGB1P25-201ENST00000468402 MAN2B2Q9Y2E5 1009 aa4.38□□□□□ -1.71
HMGB1P25-201ENST00000468402 SIK3Q9Y2K2 1263 aa4.38□□□□□ -1.71
HMGB1P25-201ENST00000468402 ATAD2BQ9ULI0 1458 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 A0A1W2PPC4 97 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 GOLGA6L3A6NEY3 463 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 DBX1A6NMT0 343 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 LGALS16A8MUM7 142 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MYO1CO00159 1063 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 EIF3FO00303 357 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 BTN3A1O00481 513 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PODXLO00592 558 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 HNRNPDLO14979 420 aaKnown RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 N4BP3O15049 544 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PLA2G6O60733 806 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 ALDH1A2O94788 518 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 FARP2O94887 1054 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PAPLNO95428 1278 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 AMY1AP04745 511 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 CD1AP06126 327 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 LDHCP07864 332 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 GAAP10253 952 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 NCAM1P13591 858 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PRDX5P30044 214 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SREBF1P36956 1147 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 AFMP43652 599 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PIK3CGP48736 1102 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 CNGB1Q14028 1251 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SIM2Q14190 667 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 POSTNQ15063 836 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 STILQ15468 1287 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MZT2AQ6P582 158 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 RFX8Q6ZV50 586 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 TAS1R1Q7RTX1 841 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 RTKN2Q8IZC4 609 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 NAXEQ8NCW5 288 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 PIK3C3Q8NEB9 887 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 REPS2Q8NFH8 660 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 INTS4Q96HW7 963 aaKnown RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 ZC3H10Q96K80 434 aaKnown RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SNX22Q96L94 193 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MRGPRX1Q96LB2 322 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 UBXN10Q96LJ8 280 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 NEUROD6Q96NK8 337 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SYT3Q9BQG1 590 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SLC6A17Q9H1V8 727 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MAGEH1Q9H213 219 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MRPL46Q9H2W6 279 aaKnown RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 SMC4Q9NTJ3 1288 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 GPRC5DQ9NZD1 345 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 COL20A1Q9P218 1284 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 MYO1AQ9UBC5 1043 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 FBXO2Q9UK22 296 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 FBXO10Q9UK96 956 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 HDAC9Q9UKV0 1011 aa4.37□□□□□ -1.71
HMGB1P25-201ENST00000468402 RUSC2Q8N2Y8 1516 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 J3KRW8 73 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 F2RL2O00254 374 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRIM38O00635 465 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 ADCY6O43306 1168 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 RASSF9O75901 435 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 RHOBTB3O94955 611 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 ANXA2P07355 339 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 C8BP07358 591 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 RAP2AP10114 183 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 IL2RBP14784 551 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 FLT3LGP49771 235 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 MEOX1P50221 254 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 NCKAP1LP55160 1127 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 ARL4CP56559 192 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 RAB32Q13637 225 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 TARBP2Q15633 366 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 KRT40Q6A162 431 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 CYP26C1Q6V0L0 522 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 UNC13DQ70J99 1090 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 UNC5BQ8IZJ1 945 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 CACNA2D3Q8IZS8 1091 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 SDR16C5Q8N3Y7 309 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 GIMAP8Q8ND71 665 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 KBTBD7Q8WVZ9 684 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 IPCEF1Q8WWN9 437 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 HOXB13Q92826 284 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 GCDHQ92947 438 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 GFM2Q969S9 779 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 C18orf8Q96DM3 657 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 MSLNLQ96KJ4 702 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 SEC62Q99442 399 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 SLC26A6Q9BXS9 759 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 STK33Q9BYT3 514 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRIM54Q9BYV2 358 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 PAK6Q9NQU5 681 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 VPS45Q9NRW7 570 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 MBNL3Q9NUK0 354 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 ING3Q9NXR8 418 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 IFT80Q9P2H3 777 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms