RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NAGPAQ9UK23 515 aa22.14■■□□□ 1.14
TMEM53-207ENST00000468117 NOC2LQ9Y3T9 749 aaKnown RBP22.14■■□□□ 1.14
TMEM53-207ENST00000468117 DDX3XO00571 662 aaKnown RBP eCLIP22.14■■□□□ 1.133e-7■■■□□ 18.6
TMEM53-207ENST00000468117 CABYRO75952 493 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 AXLP30530 894 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 BMS1Q14692 1282 aaKnown RBP22.14■■□□□ 1.13
TMEM53-207ENST00000468117 APBB1IPQ7Z5R6 666 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-207ENST00000468117 FAM228AQ86W67 206 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 GLYCTKQ8IVS8 523 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 LNX1Q8TBB1 728 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-207ENST00000468117 CCDC94Q9BW85 323 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-207ENST00000468117 IMPG2Q9BZV3 1241 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 TRIM6Q9C030 488 aaPredicted RBP22.14■■□□□ 1.13
TMEM53-207ENST00000468117 PAXBP1Q9Y5B6 917 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 TRPV2Q9Y5S1 764 aa22.14■■□□□ 1.13
TMEM53-207ENST00000468117 SGPL1O95470 568 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 ASS1P00966 412 aaKnown RBP22.13■■□□□ 1.13
TMEM53-207ENST00000468117 CHRNA1P02708 482 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 ANXA13P27216 316 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 TRPC3Q13507 836 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 ALKBH5Q6P6C2 394 aaKnown RBP22.13■■□□□ 1.13
TMEM53-207ENST00000468117 SLC47A2Q86VL8 602 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 DNAAF5Q86Y56 855 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 SLC20A1Q8WUM9 679 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 FAM81BQ96LP2 452 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 GLT1D1Q96MS3 346 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 TRMT13Q9NUP7 481 aaKnown RBP22.13■■□□□ 1.13
TMEM53-207ENST00000468117 MACROD2A1Z1Q3 448 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 MOXD2PA6NHM9 499 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 CUL2Q13617 745 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 PACSIN1Q9BY11 444 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 TSGA10Q9BZW7 698 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 CXCL16Q9H2A7 254 aa22.13■■□□□ 1.13
TMEM53-207ENST00000468117 NXF3Q9H4D5 531 aaKnown RBP22.13■■□□□ 1.13
TMEM53-207ENST00000468117 KRT19P08727 400 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 KRT5P13647 590 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 THPOP40225 353 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 NAB2Q15742 525 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 SLC35F6Q8N357 371 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 C1orf127Q8N9H9 656 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 SLC30A5Q8TAD4 765 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 EPS8L1Q8TE68 723 aa22.12■■□□□ 1.13
TMEM53-207ENST00000468117 SENP6Q9GZR1 1112 aaPredicted RBP22.12■■□□□ 1.13
TMEM53-207ENST00000468117 LUC7LQ9NQ29 371 aaKnown RBP22.12■■□□□ 1.13
TMEM53-207ENST00000468117 PDCD11Q14690 1871 aaKnown RBP22.12■■□□□ 1.13
TMEM53-207ENST00000468117 PJA2O43164 708 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 MYCP01106 439 aaPredicted RBP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 CASQ1P31415 396 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 TMEM132DQ14C87 1099 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 SGSM1Q2NKQ1 1148 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 NOP9Q86U38 636 aaKnown RBP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 RPAINQ86UA6 219 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 U2AF1L4Q8WU68 220 aaKnown RBP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 AGPAT1Q99943 283 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 SEPT11Q9NVA2 429 aaKnown RBP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 SIX4Q9UIU6 781 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 NENFQ9UMX5 172 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 NOD1Q9Y239 953 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 TNFAIP3P21580 790 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 UBXN11Q5T124 520 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 PALB2Q86YC2 1186 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 TSEN34Q9BSV6 310 aaKnown RBP22.11■■□□□ 1.13
TMEM53-207ENST00000468117 APOL6Q9BWW8 343 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 MYO1AQ9UBC5 1043 aa22.11■■□□□ 1.13
TMEM53-207ENST00000468117 A0A1W2PQ45 241 aaPredicted RBP22.1■■□□□ 1.13
TMEM53-207ENST00000468117 A0A1W2PQY0 241 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 FAM170AA1A519 330 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 RPS6KA5O75582 802 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 ITGB3P05106 788 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 MGAT3Q09327 533 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 XYLT2Q9H1B5 865 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 UNC93B1Q9H1C4 597 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 SALL4Q9UJQ4 1053 aa22.1■■□□□ 1.13
TMEM53-207ENST00000468117 NOCTQ9UK39 431 aaKnown RBP22.1■■□□□ 1.13
TMEM53-207ENST00000468117 CYP11B1P15538 503 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 ACO1P21399 889 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 TBXAS1P24557 533 aaPredicted RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 AKAP5P24588 427 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 GUCY2FP51841 1108 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 NFX1Q12986 1120 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 ZNF699Q32M78 642 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 C10orf76Q5T2E6 689 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 TAF3Q5VWG9 929 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 RPUSD2Q8IZ73 545 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 TXLNBQ8N3L3 684 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 SECISBP2LQ93073 1101 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 KIF12Q96FN5 646 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 ST3GAL5Q9UNP4 418 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 PTPN22Q9Y2R2 807 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 C2CD2Q9Y426 696 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 TMCO5BA8MYB1 307 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 RECQL4O94761 1208 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 CALCAP01258 141 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 RPLP2P05387 115 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 YARSP54577 528 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 TWF2Q6IBS0 349 aaKnown RBP22.09■■□□□ 1.13
TMEM53-207ENST00000468117 ARRDC4Q8NCT1 418 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 CXorf38Q8TB03 319 aa22.09■■□□□ 1.13
TMEM53-207ENST00000468117 SNX27Q96L92 541 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms