RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 GIT1Q9Y2X7 761 aa6.45□□□□□ -1.38
USP39-213ENST00000467885 TRIP12Q14669 1992 aaPredicted RBP6.45□□□□□ -1.38
USP39-213ENST00000467885 EVPLQ92817 2033 aa6.45□□□□□ -1.38
USP39-213ENST00000467885 BRCA2P51587 3418 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 ABHD14A-ACY1A0A1B0GW23 586 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 A0A1W2PQC6 194 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 ANO9A1A5B4 782 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 GTPBP10A4D1E9 387 aaKnown RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 ARL5CA6NH57 179 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 C3orf80F5H4A9 247 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PTGESO14684 152 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 P4HA2O15460 535 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 RECQL4O94761 1208 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 IL18RAPO95256 599 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 FGBP02675 491 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TRIM49P0CI25 452 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TRIM49CP0CI26 452 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CXCL8P10145 99 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 ACRP10323 421 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 DLATP10515 647 aaKnown RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 SKIP12755 728 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TNNI1P19237 187 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 RGS19P49795 217 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 KLK7P49862 253 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 AP3M2P53677 418 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 APBA1Q02410 837 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 ZACNQ401N2 412 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 FILIP1LQ4L180 1135 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 EPC2Q52LR7 807 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 LMBRD2Q68DH5 695 aaPredicted RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 JADE1Q6IE81 842 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PHLDB3Q6NSJ2 640 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CNKSR3Q6P9H4 555 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CD300LGQ6UXG3 332 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 ZNF365Q70YC5 407 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 APBB1IPQ7Z5R6 666 aaPredicted RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 WDR49Q8IV35 697 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 EFCAB13Q8IY85 973 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TNS4Q8IZW8 715 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TMEM199Q8N511 208 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 DPF3Q92784 378 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TATDN2Q93075 761 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TOP1MTQ969P6 601 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 C18orf25Q96B23 403 aaPredicted RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 PGBD4Q96DM1 585 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PDLIM2Q96JY6 352 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 ZFP42Q96MM3 310 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CASD1Q96PB1 797 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PPP1R10Q96QC0 940 aaKnown RBP6.44□□□□□ -1.38
USP39-213ENST00000467885 GAD1Q99259 594 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CRACR2AQ9BSW2 395 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 IL21Q9HBE4 155 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TMEM8AQ9HCN3 771 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 SIX2Q9NPC8 291 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 IL23AQ9NPF7 189 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 UBN1Q9NPG3 1134 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 C1orf112Q9NSG2 853 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 RAB20Q9NX57 234 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 TMEM161AQ9NX61 479 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 CNTN3Q9P232 1028 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PARP2Q9UGN5 583 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 SIX4Q9UIU6 781 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PLAGL2Q9UPG8 496 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 DERAQ9Y315 318 aa6.44□□□□□ -1.38
USP39-213ENST00000467885 PIRO00625 290 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 EPHB6O15197 1021 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 CBFA2T2O43439 604 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 STX10O60499 249 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 DDHD2O94830 711 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 NFICP08651 508 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 ACTN1P12814 892 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 SYN1P17600 705 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 CYP3A5P20815 502 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 RAB27AP51159 221 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 YARSP54577 528 aaKnown RBP6.43□□□□□ -1.38
USP39-213ENST00000467885 SOX4Q06945 474 aaPredicted RBP6.43□□□□□ -1.38
USP39-213ENST00000467885 SYCP1Q15431 976 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 EXOC3L4Q17RC7 722 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 SGSM1Q2NKQ1 1148 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 CLLU1OSQ5K130 101 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 TMEM240Q5SV17 173 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 KLHDC7AQ5VTJ3 777 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 TCERG1LQ5VWI1 586 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 TDRD10Q5VZ19 366 aaKnown RBP6.43□□□□□ -1.38
USP39-213ENST00000467885 KRT39Q6A163 491 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 GBP6Q6ZN66 633 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 NT5DC4Q86YG4 428 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 ZNF280BQ86YH2 543 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 VSTM4Q8IW00 320 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 C7orf61Q8IZ16 206 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 ANKRD20A12PQ8NF67 263 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 TAS1R2Q8TE23 839 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 CACTINQ8WUQ7 758 aaKnown RBP6.43□□□□□ -1.38
USP39-213ENST00000467885 ELMO3Q96BJ8 720 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 ZNF689Q96CS4 500 aaPredicted RBP6.43□□□□□ -1.38
USP39-213ENST00000467885 SNX27Q96L92 541 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 FNBP1Q96RU3 617 aa6.43□□□□□ -1.38
USP39-213ENST00000467885 PPP1R9BQ96SB3 815 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms