RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GIT1Q9Y2X7 761 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PTGESO14684 152 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CBFA2T2O43439 604 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TPM3P06753 285 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM191BP0C7N4 346 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 FGFR1P11362 822 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF75DP51815 510 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 EPHB4P54760 987 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM132DQ14C87 1099 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 HS1BP3Q53T59 392 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 XKR4Q5GH76 650 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TDRD10Q5VZ19 366 aaKnown RBP7.41□□□□□ -1.22
SCAF4-204ENST00000467731 KRT39Q6A163 491 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 SV2AQ7L0J3 742 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CD302Q8IX05 232 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ANKRD36BP1Q96IX9 119 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CRACR2AQ9BSW2 395 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TMEM8AQ9HCN3 771 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 C2CD2Q9Y426 696 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 PCDHB7Q9Y5E2 793 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 SMIM28A0A1B0GU29 152 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ABHD14A-ACY1A0A1B0GW23 586 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 LRRN2O75325 713 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 C4BPAP04003 597 aaKnown RBP7.41□□□□□ -1.22
SCAF4-204ENST00000467731 SCNN1GP51170 649 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 MYL7Q01449 175 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 BIRC3Q13489 604 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 DUOXA2Q1HG44 320 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ZACNQ401N2 412 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 FKBP15Q5T1M5 1219 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 SCARA3Q6AZY7 606 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 C15orf39Q6ZRI6 1047 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 ZNF365Q70YC5 407 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 HELQQ8TDG4 1101 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 TAS1R2Q8TE23 839 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.41□□□□□ -1.222e-15■■□□□ 11.9
SCAF4-204ENST00000467731 ELAC1Q9H777 363 aaKnown RBP7.41□□□□□ -1.22
SCAF4-204ENST00000467731 UBN1Q9NPG3 1134 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 MIOSQ9NXC5 875 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 GCNT4Q9P109 453 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 INPP5FQ9Y2H2 1132 aa7.41□□□□□ -1.22
SCAF4-204ENST00000467731 CHD9Q3L8U1 2897 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 STX10O60499 249 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 UPP2O95045 317 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 POMCP01189 267 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 KCNE1P15382 129 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 GTF2H1P32780 548 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 KLK7P49862 253 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 GUCY2FP51841 1108 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 WDR5P61964 334 aaKnown RBP7.4□□□□□ -1.22
SCAF4-204ENST00000467731 DEFB103AP81534 67 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 KCNMA1Q12791 1236 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 EXOC3L4Q17RC7 722 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 TRAPPC11Q7Z392 1133 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 NT5DC4Q86YG4 428 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 C1orf127Q8N9H9 656 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 C18orf25Q96B23 403 aaPredicted RBP7.4□□□□□ -1.22
SCAF4-204ENST00000467731 MRFAP1L1Q96HT8 127 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 SGSM3Q96HU1 749 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 PPP1R10Q96QC0 940 aaKnown RBP7.4□□□□□ -1.22
SCAF4-204ENST00000467731 PPP1R9BQ96SB3 815 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 GOLGA2P5Q9HBQ8 144 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 DONSONQ9NYP3 566 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 TUBGCP4Q9UGJ1 667 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 LRFN2Q9ULH4 789 aa7.4□□□□□ -1.22
SCAF4-204ENST00000467731 GTPBP10A4D1E9 387 aaKnown RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 ZBBXA8MT70 800 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 EFCAB14O75071 495 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 N4BP1O75113 896 aaKnown RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 BAIAP3O94812 1187 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 VNN1O95497 513 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 FGBP02675 491 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 ITGB3P05106 788 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 THP07101 528 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 ACTN1P12814 892 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 PBX1P40424 430 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 GATMP50440 423 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 AP3M2P53677 418 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 SYCP1Q15431 976 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 ZBTB6Q15916 424 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 TMEM240Q5SV17 173 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 GLB1LQ6UWU2 654 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 TMCO2Q7Z6W1 182 aaPredicted RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 FBXL13Q8NEE6 735 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 CACTINQ8WUQ7 758 aaKnown RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 ERGIC2Q96RQ1 377 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 LBHD1Q9BQE6 289 aaPredicted RBP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.23
SCAF4-204ENST00000467731 DERAQ9Y315 318 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 NR2E3Q9Y5X4 410 aa7.4□□□□□ -1.23
SCAF4-204ENST00000467731 PMM2O15305 246 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 P4HA2O15460 535 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 KIF1CO43896 1103 aaKnown RBP7.39□□□□□ -1.23
SCAF4-204ENST00000467731 TNNC2P02585 160 aa7.39□□□□□ -1.23
SCAF4-204ENST00000467731 SLC9A1P19634 815 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms