RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 ZCWPW2Q504Y3 356 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 NOMO2Q5JPE7 1267 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 VARS2Q5ST30 1063 aaKnown RBP12.03□□□□□ -0.48
PRPF3-203ENST00000467514 DCLRE1AQ6PJP8 1040 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 PADI6Q6TGC4 694 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 GET4Q7L5D6 327 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-203ENST00000467514 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.03□□□□□ -0.48
PRPF3-203ENST00000467514 SFR1Q86XK3 245 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 GPR161Q8N6U8 529 aaKnown RBP12.03□□□□□ -0.48
PRPF3-203ENST00000467514 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 RSPH1Q8WYR4 309 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 LPPQ93052 612 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 TIPINQ9BVW5 301 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 STRA6Q9BX79 667 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 SEL1LQ9UBV2 794 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 COL4A3BPQ9Y5P4 624 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 ACACBO00763 2458 aa12.03□□□□□ -0.48
PRPF3-203ENST00000467514 OTOGLQ3ZCN5 2332 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 TMEM150BA6NC51 233 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 LRRC10BA6NIK2 292 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 ZBTB42B2RXF5 422 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 INPPL1O15357 1258 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 SFPQP23246 707 aaKnown RBP eCLIP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 HOXD13P35453 343 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 CASP5P51878 434 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 LMNB2Q03252 620 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 RAD51AP2Q09MP3 1159 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 XKR3Q5GH77 459 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 ANKRD40Q6AI12 368 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 ZC3H3Q8IXZ2 948 aaKnown RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 FEZF2Q8TBJ5 459 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 SCFD1Q8WVM8 642 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 SMG7Q92540 1137 aaKnown RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 NXPE3Q969Y0 559 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 SHDQ96IW2 340 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 KLHL5Q96PQ7 755 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 CEP89Q96ST8 783 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 BCO2Q9BYV7 579 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 FOXQ1Q9C009 403 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 TRIM5Q9C035 493 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 TBC1D13Q9NVG8 400 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 INTS13Q9NVM9 706 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 SPTBN2O15020 2390 aa12.02□□□□□ -0.49
PRPF3-203ENST00000467514 KMT2BQ9UMN6 2715 aaPredicted RBP12.02□□□□□ -0.49
PRPF3-203ENST00000467514 BICDL2A1A5D9 508 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 SPTLC1O15269 473 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 HIP1RO75146 1068 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 TBCAO75347 108 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 GLUD1P00367 558 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 GALTP07902 379 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 CNPP09543 421 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 DARSP14868 501 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PHKA2P46019 1235 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 GPC3P51654 580 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NPEPPSP55786 919 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PRKCEQ02156 737 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 UBXN2BQ14CS0 331 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PLA2G4FQ68DD2 849 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PHLDB3Q6NSJ2 640 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 SLC44A3Q8N4M1 653 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NOC3LQ8WTT2 800 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 PGBD4Q96DM1 585 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NIFKQ9BYG3 293 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 XPO4Q9C0E2 1151 aaKnown RBP12.01□□□□□ -0.49
PRPF3-203ENST00000467514 ADAMTS10Q9H324 1103 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 KCTD10Q9H3F6 313 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 THAP9Q9H5L6 903 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NRDE2Q9H7Z3 1164 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 NRBP2Q9NSY0 501 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 IFNKQ9P0W0 207 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 DNAJB4Q9UDY4 337 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 SSX2IPQ9Y2D8 614 aa12.01□□□□□ -0.49
PRPF3-203ENST00000467514 A0A1B0GTH6 734 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 PPP1R37O75864 691 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 OATP04181 439 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 MAPTP10636 758 aaKnown RBP12□□□□□ -0.49
PRPF3-203ENST00000467514 SLC11A1P49279 550 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 ATXN1P54253 815 aaKnown RBP12□□□□□ -0.49
PRPF3-203ENST00000467514 ARHGAP8P85298 464 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 PLCB2Q00722 1185 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 CSTF1Q05048 431 aaKnown RBP12□□□□□ -0.49
PRPF3-203ENST00000467514 LRRC63Q05C16 580 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 TARBP2Q15633 366 aaKnown RBP12□□□□□ -0.49
PRPF3-203ENST00000467514 HS1BP3Q53T59 392 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 OTUD6AQ7L8S5 288 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 CATSPER4Q7RTX7 472 aa12□□□□□ -0.49
PRPF3-203ENST00000467514 ZNF598Q86UK7 904 aaKnown RBP12□□□□□ -0.49
PRPF3-203ENST00000467514 ST13P5Q8NFI4 369 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms