RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 PTPAQ15257 358 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 PPP4R3AQ6IN85 833 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 DCBLD1Q8N8Z6 715 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 CPEB3Q8NE35 698 aaKnown RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 KAT5Q92993 513 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 CHMP4CQ96CF2 233 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 PRRX2Q99811 253 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 RNPEPQ9H4A4 650 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 TYW1Q9NV66 732 aaKnown RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
VPS50-209ENST00000467326 CFAP20Q9Y6A4 193 aaKnown RBP4.92□□□□□ -1.62
VPS50-209ENST00000467326 A0A1B0GTW7 788 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 TCRBV7S2A1N4TA0A589 114 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 TMEM200CA6NKL6 621 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 DTNBO60941 627 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 HAUS5O94927 633 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 ZRANB2O95218 330 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS50-209ENST00000467326 CFIP05156 583 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 CD1AP06126 327 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 BMPR1AP36894 532 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 EXOSC10Q01780 885 aaKnown RBP4.91□□□□□ -1.62
VPS50-209ENST00000467326 OCA2Q04671 838 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 DPTQ07507 201 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 RAB39AQ14964 217 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 TMEM240Q5SV17 173 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 TSHZ3Q63HK5 1081 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 MRGPRGQ86SM5 289 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 MAPKAPK5Q8IW41 473 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 MIER2Q8N344 545 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 ZSWIM1Q9BR11 485 aa4.91□□□□□ -1.62
VPS50-209ENST00000467326 BCCIPQ9P287 314 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS50-209ENST00000467326 LUC7L2Q9Y383 392 aaKnown RBP4.91□□□□□ -1.62
VPS50-209ENST00000467326 TMEM191CA6NGB0 347 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 UNC119BA6NIH7 251 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 GRM6O15303 877 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 CDKL5O76039 1030 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
VPS50-209ENST00000467326 FGFR4P22455 802 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 NEK2P51955 445 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 GUCY1B3Q02153 619 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 ARMC6Q6NXE6 501 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 Q6ZPA2 131 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 CMTR2Q8IYT2 770 aaKnown RBP4.9□□□□□ -1.63
VPS50-209ENST00000467326 ULK2Q8IYT8 1036 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 FITM2Q8N6M3 262 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 NLGN4YQ8NFZ3 816 aaPredicted RBP4.9□□□□□ -1.63
VPS50-209ENST00000467326 CHFRQ96EP1 664 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 MRGPRX4Q96LA9 322 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 ADAM2Q99965 735 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 TTPALQ9BTX7 342 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 PACSIN1Q9BY11 444 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 ANKFY1Q9P2R3 1169 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 USP25Q9UHP3 1055 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 MAP3K2Q9Y2U5 619 aa4.9□□□□□ -1.63
VPS50-209ENST00000467326 GRID2IPA4D2P6 1211 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 B3GALT2O43825 422 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 RAMP2O60895 175 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 PRSS23O95084 383 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 MTHFD1P11586 935 aaKnown RBP4.89□□□□□ -1.63
VPS50-209ENST00000467326 KRT4P19013 534 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 IGBP1P78318 339 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 HSD11B2P80365 405 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 TLE1Q04724 770 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 PABPC1LQ4VXU2 614 aaKnown RBP4.89□□□□□ -1.63
VPS50-209ENST00000467326 VRK3Q8IV63 474 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 ARHGEF19Q8IW93 802 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 NSUN6Q8TEA1 469 aaKnown RBP4.89□□□□□ -1.63
VPS50-209ENST00000467326 RNF31Q96EP0 1072 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 CLPTM1LQ96KA5 538 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 SERHL2Q9H4I8 314 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 GSTO2Q9H4Y5 243 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 RNF181Q9P0P0 153 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 KCNE5Q9UJ90 142 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 PCDHB1Q9Y5F3 818 aa4.89□□□□□ -1.63
VPS50-209ENST00000467326 A0A087X1B8 175 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 PLEKHD1A6NEE1 506 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 PPFIA2O75334 1257 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 SPDEFO95238 335 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 IL33O95760 270 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 GPANK1O95872 356 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 ELANEP08246 267 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 CKBP12277 381 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 SLC6A4P31645 630 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 ZNF280AP59817 542 aaPredicted RBP4.88□□□□□ -1.63
VPS50-209ENST00000467326 NOMO3P69849 1222 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 CXADRP78310 365 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 FSTL1Q12841 308 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 RESTQ13127 1097 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 SPDYE7PQ495Y7 208 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 NOMO2Q5JPE7 1267 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 B3GNTL1Q67FW5 361 aaPredicted RBP4.88□□□□□ -1.63
VPS50-209ENST00000467326 LAIR1Q6GTX8 287 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 Q6YL49 198 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 TTC7BQ86TV6 843 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 TICAM2Q86XR7 235 aa4.88□□□□□ -1.63
VPS50-209ENST00000467326 CPA6Q8N4T0 437 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms