RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF444Q8N0Y2 327 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-207ENST00000467273 FIBCD1Q8N539 461 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 KCT2Q8NC54 265 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 DBF4BQ8NFT6 615 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 SEPT8Q92599 483 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ELMO3Q96BJ8 720 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 IL17RAQ96F46 866 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CEP95Q96GE4 821 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 EHMT1Q9H9B1 1298 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ZSWIM5Q9P217 1185 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CCPG1Q9ULG6 757 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CORINQ9Y5Q5 1042 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ST14Q9Y5Y6 855 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CAPN6Q9Y6Q1 641 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 SLC4A4Q9Y6R1 1079 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 NCOR2Q9Y618 2525 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 ACACBO00763 2458 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 MYH7P12883 1935 aa6.35□□□□□ -1.39
PTCD3-207ENST00000467273 CFAP47Q6ZTR5 3102 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 MED19A0JLT2 244 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RSPH10B2B2RC85 870 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 HAS3O00219 553 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 GOLIM4O00461 696 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 MARCH6O60337 910 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 KRT37O76014 449 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 ATE1O95260 518 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 GH1P01241 217 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 MMP3P08254 477 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RSPH10BP0C881 870 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 SDHBP21912 280 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 CTNNB1P35222 781 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 SLC1A4P43007 532 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 CLCN5P51795 746 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RARSP54136 660 aaKnown RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RRP1P56182 461 aaKnown RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 SERINC3Q13530 473 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 BAATQ14032 418 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RAB33AQ14088 237 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 HDXQ7Z353 690 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 NOP9Q86U38 636 aaKnown RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 AACSQ86V21 672 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 SERINC5Q86VE9 423 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 SUSD6Q92537 303 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 KAT2BQ92831 832 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 IFIH1Q9BYX4 1025 aaKnown RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 RANBP17Q9H2T7 1088 aaKnown RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 PAG1Q9NWQ8 432 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 CLEC1BQ9P126 229 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 HDAC6Q9UBN7 1215 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 TMEM59LQ9UK28 342 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 USP15Q9Y4E8 981 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-207ENST00000467273 BAHCC1Q9P281 2608 aa6.34□□□□□ -1.39
PTCD3-207ENST00000467273 CHD8Q9HCK8 2581 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 ADGRA3Q8IWK6 1321 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 ANKRD62A6NC57 917 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 GRM6O15303 877 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 HTR3BO95264 441 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 LINC00271P0C7V0 271 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 SRGAP2BP0DMP2 458 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 SRFP11831 508 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 IMPDH2P12268 514 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 TRIM27P14373 513 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 PTMSP20962 102 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 ANAPC15P60006 121 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 ARHGAP1Q07960 439 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 BTNL9Q6UXG8 535 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 RUFY4Q6ZNE9 571 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 FAM43BQ6ZT52 329 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-207ENST00000467273 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 FRMD5Q7Z6J6 570 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 THAP5Q7Z6K1 395 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 CLASRPQ8N2M8 674 aaKnown RBP6.33□□□□□ -1.4
PTCD3-207ENST00000467273 RBBP8NLQ8NC74 664 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-207ENST00000467273 AFG1LQ8WV93 481 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 RMDN1Q96DB5 314 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 CDCA3Q99618 268 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-207ENST00000467273 TRIM55Q9BYV6 548 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 RNF32Q9H0A6 362 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 DLL3Q9NYJ7 618 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 SORCS3Q9UPU3 1222 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 NR2E1Q9Y466 385 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 DDX49Q9Y6V7 483 aaKnown RBP6.33□□□□□ -1.4
PTCD3-207ENST00000467273 MYO7AQ13402 2215 aa6.33□□□□□ -1.4
PTCD3-207ENST00000467273 TPRP12270 2363 aaKnown RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 WDR19Q8NEZ3 1342 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-207ENST00000467273 PTPDC1A2A3K4 754 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 PRAMEF27A3QJZ7 478 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 LINC01565O15544 149 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 ANP32CO43423 234 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 PPFIA4O75335 1185 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 BCAR3O75815 825 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 TSPY3P0CV98 308 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 TSPY8P0CW00 308 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 GNAT2P19087 354 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 HOXC8P31273 242 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 THPOP40225 353 aa6.32□□□□□ -1.4
PTCD3-207ENST00000467273 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms