RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 INTS8Q75QN2 995 aaKnown RBP19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 MIER3Q7Z3K6 550 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 RASGEF1CQ8N431 466 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 IWS1Q96ST2 819 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 CBWD1Q9BRT8 395 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 GPR88Q9GZN0 384 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 OCEL1Q9H607 264 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 TMEM165Q9HC07 324 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 NMRK1Q9NWW6 199 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 ZNF510Q9Y2H8 683 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 ZHX2Q9Y6X8 837 aa19.21■□□□□ 0.67
SNAPC3-205ENST00000467062 FOXN3O00409 490 aaPredicted RBP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 EIF3DO15371 548 aaKnown RBP eCLIP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 SOX5P35711 763 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 SPP2Q13103 211 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 ACVR2BQ13705 512 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 SH2D4BQ5SQS7 431 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 RNF25Q96BH1 459 aaPredicted RBP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 RMDN2Q96LZ7 410 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 LARSQ9P2J5 1176 aaKnown RBP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 NR2E1Q9Y466 385 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 STK24Q9Y6E0 443 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 FRMPD4Q14CM0 1322 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 GOLGA8IPA6NC78 632 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 GOLGA8JA6NMD2 632 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 SETDB1Q15047 1291 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 C10orf76Q5T2E6 689 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 VSIG1Q86XK7 387 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 SLC35G2Q8TBE7 412 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 LRRC8CQ8TDW0 803 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 GRAMD1AQ96CP6 724 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 CELF4Q9BZC1 486 aaKnown RBP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 TRIM31Q9BZY9 425 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 FZD1Q9UP38 647 aa19.2■□□□□ 0.66
SNAPC3-205ENST00000467062 H0Y3Z8 333 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 WNT10BO00744 389 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 ATP9AO75110 1047 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 TJP3O95049 919 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 FAM200BP0CF97 657 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 GM2AP17900 193 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 GCLMP48507 274 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 MCL1Q07820 350 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 SLC29A2Q14542 456 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 PPP2R5EQ16537 467 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 TNFAIP8L3Q5GJ75 292 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 VPS36Q86VN1 386 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 ARHGEF26Q96DR7 871 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 PPP1R9AQ9ULJ8 1098 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 SORBS3O60504 671 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 RASSF2P50749 326 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 MRPS9P82933 396 aaKnown RBP19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 OCRLQ01968 901 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 PRPF4BQ13523 1007 aaKnown RBP19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 CCDC6Q16204 474 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 SLC20A1Q8WUM9 679 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 KAT5Q92993 513 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 CCDC28BQ9BUN5 200 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 CARD9Q9H257 536 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 ZDHHC18Q9NUE0 388 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 USP20Q9Y2K6 914 aa19.19■□□□□ 0.66
SNAPC3-205ENST00000467062 COL4A5P29400 1685 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 RASGRF2O14827 1237 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 NPEPPSP55786 919 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 KPNB1Q14974 876 aaKnown RBP19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 UGCGQ16739 394 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 B3GNT9Q6UX72 402 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 FAM84AQ96KN4 292 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 KIFC3Q9BVG8 833 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 STK33Q9BYT3 514 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 THAP2Q9H0W7 228 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 DMAC2Q9NW81 257 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 EMSYQ7Z589 1322 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 DHX15O43143 795 aaKnown RBP19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 DPEP1P16444 411 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 SOX10P56693 466 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 MYL7Q01449 175 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 PPP3CAQ08209 521 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 BFSP1Q12934 665 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 LRRC14Q15048 493 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 CNPY1Q3B7I2 92 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 CEP128Q6ZU80 1094 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 MGARPQ8TDB4 240 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 CKAP2Q8WWK9 683 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 TAAR1Q96RJ0 339 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 TRIM51Q9BSJ1 452 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 IQCGQ9H095 443 aaKnown RBP19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 UBE2TQ9NPD8 197 aaPredicted RBP19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 CIDEBQ9UHD4 219 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 COMMD3-BMI1R4GMX3 469 aa19.18■□□□□ 0.66
SNAPC3-205ENST00000467062 SIGLEC16A6NMB1 481 aa19.17■□□□□ 0.66
SNAPC3-205ENST00000467062 ZNF211Q13398 564 aaPredicted RBP19.17■□□□□ 0.66
SNAPC3-205ENST00000467062 PLA2G4FQ68DD2 849 aa19.17■□□□□ 0.66
SNAPC3-205ENST00000467062 SLC30A5Q8TAD4 765 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms