RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CDH6P55285 790 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 E4F1Q66K89 784 aaPredicted RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 PID1Q7Z2X4 250 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 RHOT1Q8IXI2 618 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 SNF8Q96H20 258 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ELAC2Q9BQ52 826 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 ARHGAP26Q9UNA1 814 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ADGRB1O14514 1584 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 UBE2Q2LH0YL09 131 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 PMS2P54278 862 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 TRIM48Q8IWZ4 208 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 RNF149Q8NC42 400 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 RFWD2Q8NHY2 731 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 EIF2AK1Q9BQI3 630 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 GH1P01241 217 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 NCALDP61601 193 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 KCNH2Q12809 1159 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ALX1Q15699 326 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 HAUS6Q7Z4H7 955 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ENAHQ8N8S7 591 aaPredicted RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 SLC13A1Q9BZW2 595 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 NDEL1Q9GZM8 345 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 UNC45AQ9H3U1 944 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 STN1Q9H668 368 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 MAN1C1Q9NR34 630 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 CHGBP05060 677 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 GSNP06396 782 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ABCE1P61221 599 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 GFPT1Q06210 699 aaPredicted RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 PHKG1Q16816 387 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 LY9Q9HBG7 655 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ORC4O43929 436 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 HAUS5O94927 633 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 RARBP10826 455 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ITGA4P13612 1032 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 GUCY2CP25092 1073 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 HPCAP84074 193 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 RESTQ13127 1097 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 DMC1Q14565 340 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
HPS4-209ENST00000466781 LDHDQ86WU2 507 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ZBED8Q8IZ13 594 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 ATXN7L3BQ96GX2 97 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 PFASO15067 1338 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TARSL2A2RTX5 802 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 GUCA1CO95843 209 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 YWHABP31946 246 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 STAT5BP51692 787 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 AP2B1P63010 937 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TRADDQ15628 312 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 C12orf60Q5U649 245 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 FAM117BQ6P1L5 589 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TSPAN17Q96FV3 270 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 ELMO2Q96JJ3 720 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 PCDHA10Q9Y5I2 948 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 MAP2P11137 1827 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 GSG1L2A8MUP6 293 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 SUPT3HB4E1H0 165 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 RPS6KA5O75582 802 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 LRG1P02750 347 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 C6orf222P0C671 652 aaPredicted RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TCF3P15923 654 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 IL10P22301 178 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 YY1P25490 414 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TYK2P29597 1187 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 KRT17Q04695 432 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 C16orf72Q14CZ0 275 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 MGAT5BQ3V5L5 792 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 DCP1BQ8IZD4 617 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 ATP11CQ8NB49 1132 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 FHDC1Q9C0D6 1143 aaPredicted RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 SPATS2LQ9NUQ6 558 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 RCOR1Q9UKL0 485 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 POLRMTO00411 1230 aaKnown RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 CHUKO15111 745 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 PLSCR1O15162 318 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 CDC27P30260 824 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 ALDH1A3P47895 512 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 LRRC74AQ0VAA2 488 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 TMEM132DQ14C87 1099 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 CHMP1BQ7LBR1 199 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 FBXO33Q7Z6M2 555 aa9.16□□□□□ -0.94
HPS4-209ENST00000466781 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
HPS4-209ENST00000466781 MED15Q96RN5 788 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms