RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 CST3P01034 146 aaPredicted RBP22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 CDR2Q01850 454 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 SP3Q02447 781 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 PCBP1Q15365 356 aaKnown RBP eCLIP22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 ELF2Q15723 593 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 ERCC6LQ2NKX8 1250 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 CTNNBL1Q8WYA6 563 aaPredicted RBP22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 ANKRD7Q92527 254 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 UBXN4Q92575 508 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 ANKRD36BP1Q96IX9 119 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 HTTP42858 3142 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 DNAH12Q6ZR08 3092 aa22.69■■□□□ 1.22
PPP1R3F-203ENST00000466508 C17orf102A2RUQ5 167 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 GRID2IPA4D2P6 1211 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 ANKRD62A6NC57 917 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 SEPT4O43236 478 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 TNNC2P02585 160 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 GNAT1P11488 350 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 PRLRP16471 622 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 CAP1Q01518 475 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 FMO1Q01740 532 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 TAF3Q5VWG9 929 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 C7orf31Q8N865 590 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 DNAJB3Q8WWF6 145 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 DDX1Q92499 740 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 UPF3AQ9H1J1 476 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 ISCUQ9H1K1 167 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 UMODL1Q5DID0 1318 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 MMEP08473 750 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 GZMAP12544 262 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 ACO1P21399 889 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 NOP2P46087 812 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 SGSM1Q2NKQ1 1148 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 GNASQ5JWF2 1037 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 SCARA3Q6AZY7 606 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 ZNF710Q8N1W2 664 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 RFFLQ8WZ73 363 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 PCDHB18PQ96TA0 734 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 OSMRQ99650 979 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 PUF60Q9UHX1 559 aaKnown RBP22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 RALGAPA2Q2PPJ7 1873 aa22.68■■□□□ 1.22
PPP1R3F-203ENST00000466508 TRIP11Q15643 1979 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 SRGAP2O75044 1071 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 CLSTN1O94985 981 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 DARSP14868 501 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 FGFR4P22455 802 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 BPIFB4P59827 614 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 MYL6P60660 151 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 TRPC3Q13507 836 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 DCAF4L1Q3SXM0 396 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 RSRC2Q7L4I2 434 aaKnown RBP22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 TNS4Q8IZW8 715 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 MTG1Q9BT17 334 aaPredicted RBP22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 TLR10Q9BXR5 811 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 CFHR5Q9BXR6 569 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 ASB7Q9H672 318 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 CDHR5Q9HBB8 845 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 SPC25Q9HBM1 224 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 PCDHB2Q9Y5E7 798 aa22.67■■□□□ 1.22
PPP1R3F-203ENST00000466508 LACTBL1A8MY62 500 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 MEFVO15553 781 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 RTN2O75298 545 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 RARBP10826 455 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 ABCB4P21439 1286 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 HOXA11P31270 313 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 NKX3-2P78367 333 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 ZNF200P98182 395 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 CACNB2Q08289 660 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 TRIM32Q13049 653 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 CATSPER4Q7RTX7 472 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 GOLGA1Q92805 767 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 CNTN6Q9UQ52 1028 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 HYOU1Q9Y4L1 999 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 PGK1P00558 417 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 FTLP02792 175 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 NFICP08651 508 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 TCP1P17987 556 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 EIF4BP23588 611 aaKnown RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 SLC10A6Q3KNW5 377 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 APBB1IPQ7Z5R6 666 aaPredicted RBP22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 ZNF677Q86XU0 584 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 LRRC57Q8N9N7 239 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 TPCN2Q8NHX9 752 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 THAP2Q9H0W7 228 aa22.66■■□□□ 1.22
PPP1R3F-203ENST00000466508 CTAGE15A4D2H0 777 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 CTAGE8P0CG41 777 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 JADE1Q6IE81 842 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 CTAGE6Q86UF2 777 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 CTAGE4Q8IX94 777 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 OSBPL9Q96SU4 736 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 XYLT2Q9H1B5 865 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 PCDHB4Q9Y5E5 795 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 MROH7Q68CQ1 1323 aa22.65■■□□□ 1.22
PPP1R3F-203ENST00000466508 NCK2O43639 380 aa22.64■■□□□ 1.22
PPP1R3F-203ENST00000466508 FTCDO95954 541 aa22.64■■□□□ 1.22
PPP1R3F-203ENST00000466508 GRM5P41594 1212 aa22.64■■□□□ 1.22
PPP1R3F-203ENST00000466508 CKAP4Q07065 602 aaKnown RBP22.64■■□□□ 1.22
PPP1R3F-203ENST00000466508 ZNF699Q32M78 642 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms