RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 KIAA1328Q86T90 577 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 MAP4K3Q8IVH8 894 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 CMTR2Q8IYT2 770 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 LRRC43Q8N309 656 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 TIFAQ96CG3 184 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 CCDC42Q96M95 316 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 RPS6KC1Q96S38 1066 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 ACO2Q99798 780 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 TMEM117Q9H0C3 514 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 PDZD7Q9H5P4 517 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 AAASQ9NRG9 546 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TOPORSQ9NS56 1045 aaPredicted RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 ZNF446Q9NWS9 450 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 BZW2Q9Y6E2 419 aaKnown RBP10.82□□□□□ -0.68
PMF1-204ENST00000466489 COL4A6Q14031 1691 aa10.82□□□□□ -0.68
PMF1-204ENST00000466489 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 GRXCR1A8MXD5 290 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 OPA1O60313 960 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 DGKIO75912 1065 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 MCF2P10911 925 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 CCNE1P24864 410 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 PAFAH1B1P43034 410 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 RNASELQ05823 741 aaKnown RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 SPOUT1Q5T280 376 aaKnown RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 ZNF697Q5TEC3 545 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 GPR153Q6NV75 609 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 TOGARAM2Q6ZUX3 1019 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 HS2ST1Q7LGA3 356 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 RTN4RL1Q86UN2 441 aaPredicted RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 SPATS2Q86XZ4 545 aaKnown RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 GRAMD1CQ8IYS0 662 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 FIBCD1Q8N539 461 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 CSGALNACT2Q8N6G5 542 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 SAMD11Q96NU1 681 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 FAM193BQ96PV7 902 aaPredicted RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 ERGIC2Q96RQ1 377 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 WDR24Q96S15 920 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 TARS2Q9BW92 718 aaKnown RBP10.81□□□□□ -0.68
PMF1-204ENST00000466489 FUT8Q9BYC5 575 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 PBX4Q9BYU1 374 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 RSAD1Q9HA92 442 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 LZTFL1Q9NQ48 299 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 KANSL3Q9P2N6 904 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 L1RE1Q9UN81 338 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 IPPQ9Y573 584 aa10.81□□□□□ -0.68
PMF1-204ENST00000466489 KIAA0391O15091 583 aaKnown RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 PIGRP01833 764 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 GYPCP04921 128 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 CA3P07451 260 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 AARSP49588 968 aaKnown RBP eCLIP10.8□□□□□ -0.68
PMF1-204ENST00000466489 RABGGTBP53611 331 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 SNRPFP62306 86 aaKnown RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 HTRA4P83105 476 aaPredicted RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 ZC2HC1CQ53FD0 456 aaPredicted RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 CCDC122Q5T0U0 273 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 ALS2CLQ60I27 953 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 FAM109BQ6ICB4 259 aaPredicted RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 MRPL10Q7Z7H8 261 aaKnown RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 POMGNT1Q8WZA1 660 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 TUBGCP2Q9BSJ2 902 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 CRACR2AQ9BSW2 395 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 APOL6Q9BWW8 343 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 PARP2Q9UGN5 583 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 CTNND2Q9UQB3 1225 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 INPP5FQ9Y2H2 1132 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 GIT1Q9Y2X7 761 aa10.8□□□□□ -0.68
PMF1-204ENST00000466489 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.8□□□□□ -0.68
PMF1-204ENST00000466489 TRIP11Q15643 1979 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 PPP1R37O75864 691 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 LDHAP00338 332 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 MYBP10242 640 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 FGFR1P11362 822 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 CASP1P29466 404 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 GRM5P41594 1212 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 PAN2Q504Q3 1202 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 NOMO2Q5JPE7 1267 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 BEND6Q5SZJ8 279 aaPredicted RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 TAS1R3Q7RTX0 852 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 TMCO2Q7Z6W1 182 aaPredicted RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 ZNF598Q86UK7 904 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 CDR2LQ86X02 465 aaPredicted RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 GUF1Q8N442 669 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 HELQQ8TDG4 1101 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 P2RX5Q93086 422 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 TGS1Q96RS0 853 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 ARID3AQ99856 593 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 MSTO1Q9BUK6 570 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 CDT1Q9H211 546 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
PMF1-204ENST00000466489 NXF3Q9H4D5 531 aaKnown RBP10.79□□□□□ -0.68
PMF1-204ENST00000466489 SLC39A2Q9NP94 309 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms