RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 DUSP15Q9H1R2 295 aaPredicted RBP16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 BACE2Q9Y5Z0 518 aa16.32■□□□□ 0.2
HMGXB4-206ENST00000466438 BCLAF3A2AJT9 711 aaKnown RBP16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 PRRG1O14668 218 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 REC8O95072 547 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 ARF4P18085 180 aaPredicted RBP16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 PTENP60484 403 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 CEP170P1Q96L14 293 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 RBM8AQ9Y5S9 174 aaKnown RBP16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 EML5Q05BV3 1969 aa16.31■□□□□ 0.2
HMGXB4-206ENST00000466438 BPTFQ12830 3046 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 EIF4E1BA6NMX2 242 aaKnown RBP16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 EDIL3O43854 480 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 RHOBTB1O94844 696 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 NPTXRO95502 500 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 CAPNS1P04632 268 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 ELF1P32519 619 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 FGD1P98174 961 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 FCHO2Q0JRZ9 810 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 PON2Q15165 354 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 AMHR2Q16671 573 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 COL28A1Q2UY09 1125 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 SLC27A1Q6PCB7 646 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 ANKS3Q6ZW76 656 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 IFNLR1Q8IU57 520 aaPredicted RBP16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 ZNF579Q8NAF0 562 aaKnown RBP16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 DEFB124Q8NES8 71 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
HMGXB4-206ENST00000466438 CDX4O14627 284 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 MOSPD3O75425 235 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 CHMLP26374 656 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 GNA11P29992 359 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 USP11P51784 963 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 ROR1Q01973 937 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 MBTD1Q05BQ5 628 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 BBC3Q96PG8 261 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 SLC8A2Q9UPR5 921 aa16.29■□□□□ 0.2
HMGXB4-206ENST00000466438 TMEM189-UBE2V1I3L0A0 370 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 PTGESO14684 152 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 KHNYNO15037 678 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 SGSM2O43147 1006 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 DKC1O60832 514 aaKnown RBP eCLIP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 ABLIM3O94929 683 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 THP07101 528 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 QARSP47897 775 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 POU5F1BQ06416 359 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 MXD4Q14582 209 aaPredicted RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 EMC2Q15006 297 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 KARSQ15046 597 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 Q4G0T1 1027 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 SLC8B1Q6J4K2 584 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 TCEAL8Q8IYN2 117 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 ELMOD1Q8N336 334 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 CAMKK1Q8N5S9 505 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 LEMD2Q8NC56 503 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 RSPRY1Q96DX4 576 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 DDX27Q96GQ7 796 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 SLC32A1Q9H598 525 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 RTN4Q9NQC3 1192 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 INSL5Q9Y5Q6 135 aa16.28■□□□□ 0.2
HMGXB4-206ENST00000466438 FAM221BA6H8Z2 402 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 B4GALT5O43286 388 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 ZBTB43O43298 467 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 ATG13O75143 517 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 ATF2P15336 505 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 TKTP29401 623 aaKnown RBP16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 EPHA5P54756 1037 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 TFDP1Q14186 410 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 NAB2Q15742 525 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 CDR2LQ86X02 465 aaPredicted RBP16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 BICD2Q8TD16 824 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 SLITRK6Q9H5Y7 841 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 CYP4F11Q9HBI6 524 aa16.27■□□□□ 0.2
HMGXB4-206ENST00000466438 A0A1B0GUA9 196 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 EPB41L2O43491 1005 aaKnown RBP16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 SEC24BO95487 1268 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 MYL4P12829 197 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 GJA1P17302 382 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 TEAD2Q15562 447 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 TTC8Q8TAM2 541 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 ZNF512Q96ME7 567 aaPredicted RBP16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 MTRQ99707 1265 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 ASAH2Q9NR71 780 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms