RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ALCAMQ13740 583 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
SDF4-205ENST00000465727 ZNF449Q6P9G9 518 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 OTOP1Q7RTM1 612 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 ZCCHC9Q8N567 271 aaKnown RBP20.97■□□□□ 0.95
SDF4-205ENST00000465727 RDH13Q8NBN7 331 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 RNF217Q8TC41 542 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 ATG4AQ8WYN0 398 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 TRAPPC9Q96Q05 1148 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 NACC1Q96RE7 527 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 SMC6Q96SB8 1091 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 TMEM206Q9H813 350 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.97■□□□□ 0.952e-9■■■■■ 35.8
SDF4-205ENST00000465727 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
SDF4-205ENST00000465727 NRAPQ86VF7 1730 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 RRM1P23921 792 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 MAGEA4P43358 317 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 CDR2Q01850 454 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 OCRLQ01968 901 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 PTP4A2Q12974 167 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 RASA2Q15283 850 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 CCNG2Q16589 344 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 GRIPAP1Q4V328 841 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 FYB2Q5VWT5 728 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 CCDC125Q86Z20 511 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 SHC3Q92529 594 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 DYDC2Q96IM9 177 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 TRABDQ9H4I3 376 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 CYLDQ9NQC7 956 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 ZFP69BQ9UJL9 534 aa20.97■□□□□ 0.95
SDF4-205ENST00000465727 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
SDF4-205ENST00000465727 SPDYE5A6NIY4 337 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 ZWINTO95229 277 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 HLA-DOAP06340 250 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 SKIP12755 728 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 GPSM2P81274 684 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 TRIP13Q15645 432 aaPredicted RBP20.96■□□□□ 0.95
SDF4-205ENST00000465727 IZUMO3Q5VZ72 239 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 ACAD10Q6JQN1 1059 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 FBXO11Q86XK2 927 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 C9orf72Q96LT7 481 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 SCOCQ9UIL1 159 aa20.96■□□□□ 0.95
SDF4-205ENST00000465727 IGLV3-22A0A075B6J6 115 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 CYP26A1O43174 497 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 ENTPD5O75356 428 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 CBX6O95503 412 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 MAPK4P31152 587 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 PDCD2Q16342 344 aaPredicted RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 MTHFD1LQ6UB35 978 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 C4orf50Q6ZRC1 276 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 ANKS1BQ7Z6G8 1248 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 SLC47A2Q86VL8 602 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 SUPT20HQ8NEM7 779 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 TTC8Q8TAM2 541 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 RBM15Q96T37 977 aaKnown RBP eCLIP20.95■□□□□ 0.947e-7■□□□□ 10.2
SDF4-205ENST00000465727 SSU72Q9NP77 194 aaKnown RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 SLCO1B3Q9NPD5 702 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 NMRK1Q9NWW6 199 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 GGA1Q9UJY5 639 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 SUGT1Q9Y2Z0 365 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 RBBP6Q7Z6E9 1792 aaKnown RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 H0Y3Z8 333 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 CCDC22O60826 627 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 RTN3O95197 1032 aaPredicted RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 CYP11B1P15538 503 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 GCLMP48507 274 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 MXI1P50539 228 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 TUBP50607 506 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 TAF1BQ53T94 588 aaPredicted RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 SLFN13Q68D06 897 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 KIFAP3Q92845 792 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 KIAA1586Q9HCI6 787 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 DDX4Q9NQI0 724 aaKnown RBP20.95■□□□□ 0.94
SDF4-205ENST00000465727 NYAP2Q9P242 653 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 WDR35Q9P2L0 1181 aa20.95■□□□□ 0.94
SDF4-205ENST00000465727 SIGLEC16A6NMB1 481 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 EIF4E1BA6NMX2 242 aaKnown RBP20.94■□□□□ 0.94
SDF4-205ENST00000465727 SPAG7O75391 227 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 PSMD10O75832 226 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 AP1G2O75843 785 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 MAPTP10636 758 aaKnown RBP20.94■□□□□ 0.94
SDF4-205ENST00000465727 KLF1Q13351 362 aaPredicted RBP20.94■□□□□ 0.94
SDF4-205ENST00000465727 CCDC6Q16204 474 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 NLRP9Q7RTR0 991 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 KIAA0825Q8IV33 1275 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 SPOCK2Q92563 424 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 AVENQ9NQS1 362 aaPredicted RBP20.94■□□□□ 0.94
SDF4-205ENST00000465727 ANAPC7Q9UJX3 599 aa20.94■□□□□ 0.94
SDF4-205ENST00000465727 PIK3CDO00329 1044 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 GCAP28676 217 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 PRELPP51888 382 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 NSMFQ6X4W1 530 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 CLNKQ7Z7G1 428 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 CYP2W1Q8TAV3 490 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 KAT5Q92993 513 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 IFT43Q96FT9 208 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 KREMEN1Q96MU8 473 aa20.93■□□□□ 0.94
SDF4-205ENST00000465727 PWWP2AQ96N64 755 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms