RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 NCANO14594 1321 aa11.35□□□□□ -0.59
GPNMB-206ENST00000465673 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ARHGEF35A5YM69 484 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 NCAM2O15394 837 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ABLIM3O94929 683 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 LRG1P02750 347 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 TDGF1P13385 188 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 MAGEA9P43362 315 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 NAMPTP43490 491 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 DMWDQ09019 674 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 SRSF5Q13243 272 aaKnown RBP11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ME3Q16798 604 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ATF7IP2Q5U623 682 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 VITQ6UXI7 678 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ANKS3Q6ZW76 656 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
GPNMB-206ENST00000465673 WASF1Q92558 559 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 NACC1Q96RE7 527 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 LMAN1LQ9HAT1 526 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 CYP4F11Q9HBI6 524 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 BRMS1Q9HCU9 246 aa11.34□□□□□ -0.59
GPNMB-206ENST00000465673 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.34□□□□□ -0.59
GPNMB-206ENST00000465673 KMT2BQ9UMN6 2715 aaPredicted RBP11.34□□□□□ -0.59
GPNMB-206ENST00000465673 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 TBC1D4O60343 1298 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 MOSPD3O75425 235 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 GDI1P31150 447 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 ELF1P32519 619 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 RBM25P49756 843 aaKnown RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 SATB1Q01826 763 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 LMNB2Q03252 620 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 GAS6Q14393 721 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF174Q15697 407 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 DCAF4L1Q3SXM0 396 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 SLC8B1Q6J4K2 584 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 SECISBP2LQ93073 1101 aaKnown RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 C18orf25Q96B23 403 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 ASB16Q96NS5 453 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 TRMT61BQ9BVS5 477 aaKnown RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 CDT1Q9H211 546 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 CHRDQ9H2X0 955 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 ZFP14Q9HCL3 533 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF334Q9HCZ1 680 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 AVENQ9NQS1 362 aaPredicted RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 CEP72Q9P209 647 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
GPNMB-206ENST00000465673 INSL5Q9Y5Q6 135 aa11.33□□□□□ -0.6
GPNMB-206ENST00000465673 PRR5-ARHGAP8B1AHC4 643 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 PODXLO00592 558 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 TRAPPC3O43617 180 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 MYL4P12829 197 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 ATF2P15336 505 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 CCNE1P24864 410 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 RPA1P27694 616 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 ARHGAP8P85298 464 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 ST3GAL1Q11201 340 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 ALKAL1Q6UXT8 129 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 PRR23BQ6ZRT6 265 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 RTL10Q7L3V2 364 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 TCEAL8Q8IYN2 117 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 GPR161Q8N6U8 529 aaKnown RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 FAM3CQ92520 227 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 GTF3C6Q969F1 213 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 TARS2Q9BW92 718 aaKnown RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 BHMT2Q9H2M3 363 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 RBM12Q9NTZ6 932 aaKnown RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 C2orf42Q9NWW7 574 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 GMEB2Q9UKD1 530 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 PIAS3Q9Y6X2 628 aa11.32□□□□□ -0.6
GPNMB-206ENST00000465673 MAP1BP46821 2468 aaKnown RBP11.32□□□□□ -0.6
GPNMB-206ENST00000465673 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 CCDC169A6NNP5 214 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 CHURC1-FNTBB4DL54 471 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 K7ERI5 159 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 HRO43593 1189 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 GDF9O60383 454 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 CHRNB1P11230 501 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 HARSP12081 509 aaKnown RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 SDHBP21912 280 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 GRM5P41594 1212 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 SOX9P48436 509 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 FNTBP49356 437 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 PEX3P56589 373 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TWF1Q12792 350 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 MRPL58Q14197 206 aaKnown RBP11.31□□□□□ -0.6
GPNMB-206ENST00000465673 PPP2R5AQ15172 486 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 TEAD2Q15562 447 aa11.31□□□□□ -0.6
GPNMB-206ENST00000465673 ZNF568Q3ZCX4 644 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms