RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SEPT2Q15019 361 aa7.02□□□□□ -1.29
SMC4-205ENST00000465563 CYP2A13Q16696 494 aa7.02□□□□□ -1.29
SMC4-205ENST00000465563 ZNF362Q5T0B9 420 aaPredicted RBP7.02□□□□□ -1.29
SMC4-205ENST00000465563 PTCD3Q96EY7 689 aaKnown RBP7.02□□□□□ -1.29
SMC4-205ENST00000465563 AIFM2Q9BRQ8 373 aa7.02□□□□□ -1.29
SMC4-205ENST00000465563 CCM2LQ9NUG4 571 aaPredicted RBP7.02□□□□□ -1.29
SMC4-205ENST00000465563 PCDHGA2Q9Y5H1 932 aa7.02□□□□□ -1.29
SMC4-205ENST00000465563 MYADML2A6NDP7 307 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 FAM171A2A8MVW0 826 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 GPR32O75388 356 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 ERN1O75460 977 aaKnown RBP7.01□□□□□ -1.29
SMC4-205ENST00000465563 HSD3B2P26439 372 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 SLC6A9P48067 706 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 MASP1P48740 699 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 MTNR1BP49286 362 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 MRPS35P82673 323 aaKnown RBP7.01□□□□□ -1.29
SMC4-205ENST00000465563 COLGALT2Q8IYK4 626 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 FITM2Q8N6M3 262 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 CCHCR1Q8TD31 782 aa7.01□□□□□ -1.29
SMC4-205ENST00000465563 MARS2Q96GW9 593 aaKnown RBP7.01□□□□□ -1.29
SMC4-205ENST00000465563 UNKLQ9H9P5 680 aaKnown RBP7.01□□□□□ -1.29
SMC4-205ENST00000465563 EYA4O95677 639 aa7□□□□□ -1.29
SMC4-205ENST00000465563 IGLV2-14P01704 120 aa7□□□□□ -1.29
SMC4-205ENST00000465563 OSMP13725 252 aa7□□□□□ -1.29
SMC4-205ENST00000465563 VAV2P52735 878 aa7□□□□□ -1.29
SMC4-205ENST00000465563 NUP133Q8WUM0 1156 aa7□□□□□ -1.29
SMC4-205ENST00000465563 PNKPQ96T60 521 aa7□□□□□ -1.29
SMC4-205ENST00000465563 GSTO2Q9H4Y5 243 aa7□□□□□ -1.29
SMC4-205ENST00000465563 MANSC1Q9H8J5 431 aa7□□□□□ -1.29
SMC4-205ENST00000465563 FOXJ2Q9P0K8 574 aa7□□□□□ -1.29
SMC4-205ENST00000465563 DNM3Q9UQ16 869 aa7□□□□□ -1.29
SMC4-205ENST00000465563 RUVBL1Q9Y265 456 aaKnown RBP7□□□□□ -1.29
SMC4-205ENST00000465563 PRKD3O94806 890 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 CDK4P11802 303 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 CACNA2D1P54289 1103 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 MTM1Q13496 603 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 ACTRT2Q8TDY3 377 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 MED15Q96RN5 788 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 SEMA4GQ9NTN9 838 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 KCTD5Q9NXV2 234 aa6.99□□□□□ -1.29
SMC4-205ENST00000465563 GPR39O43194 453 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 AMY1AP04745 511 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 DDCP20711 480 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 NOMO3P69849 1222 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 CREMQ03060 361 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 ARHGEF25Q86VW2 580 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 LNX2Q8N448 690 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 PDLIM2Q96JY6 352 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 GPR45Q9Y5Y3 372 aa6.98□□□□□ -1.29
SMC4-205ENST00000465563 POLR2AP24928 1970 aaKnown RBP6.97□□□□□ -1.29
SMC4-205ENST00000465563 TCRBV7S2A1N4TA0A589 114 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 MGST3O14880 152 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 ATP2B3Q16720 1220 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 GEN1Q17RS7 908 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 LHFPL2Q6ZUX7 228 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 SPATS2Q86XZ4 545 aaKnown RBP6.97□□□□□ -1.29
SMC4-205ENST00000465563 ZGPATQ8N5A5 531 aaKnown RBP6.97□□□□□ -1.29
SMC4-205ENST00000465563 OR2I1PQ8NGU4 316 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 WDR66Q8TBY9 1149 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 C7orf25Q9BPX7 421 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 SLC17A6Q9P2U8 582 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 HSFX1Q9UBD0 423 aa6.97□□□□□ -1.29
SMC4-205ENST00000465563 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
SMC4-205ENST00000465563 MYBBP1AQ9BQG0 1328 aaKnown RBP6.97□□□□□ -1.29
SMC4-205ENST00000465563 TRGV11A0A075B6L2 103 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 CDHR4A6H8M9 788 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 KIAA0391O15091 583 aaKnown RBP6.96□□□□□ -1.3
SMC4-205ENST00000465563 MATN4O95460 622 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 ATP8B2P98198 1209 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 NHLH1Q02575 133 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 NLGN4YQ8NFZ3 816 aaPredicted RBP6.96□□□□□ -1.3
SMC4-205ENST00000465563 TBC1D15Q8TC07 691 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 ZNF384Q8TF68 577 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 HEPHQ9BQS7 1158 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 WASHC2AQ641Q2 1341 aa6.96□□□□□ -1.3
SMC4-205ENST00000465563 PEX1O43933 1283 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 ZFPL1O95159 310 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 CNGA1P29973 690 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 DACT2Q5SW24 774 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 RNF219Q5W0B1 726 aaPredicted RBP6.95□□□□□ -1.3
SMC4-205ENST00000465563 SP5Q6BEB4 398 aaPredicted RBP6.95□□□□□ -1.3
SMC4-205ENST00000465563 SDE2Q6IQ49 451 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 SLC2A13Q96QE2 648 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 FRMD4BQ9Y2L6 1034 aa6.95□□□□□ -1.3
SMC4-205ENST00000465563 C1QL1O75973 258 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 AGXTP21549 392 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 ERVK-21P61565 698 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 SLFN5Q08AF3 891 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.94□□□□□ -1.3
SMC4-205ENST00000465563 KRT26Q7Z3Y9 468 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.94□□□□□ -1.3
SMC4-205ENST00000465563 COG1Q8WTW3 980 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 DPF2Q92785 391 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 C11orf54Q9H0W9 315 aaPredicted RBP6.94□□□□□ -1.3
SMC4-205ENST00000465563 KLK15Q9H2R5 256 aa6.94□□□□□ -1.3
SMC4-205ENST00000465563 ZNF277Q9NRM2 450 aaPredicted RBP6.94□□□□□ -1.3
SMC4-205ENST00000465563 INO80B-WBP1J3KQ70 363 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms