RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 MTCL1Q9Y4B5 1905 aaKnown RBP13.27□□□□□ -0.28
XRN1-204ENST00000465074 A0A0B4J269 797 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 ADAM12O43184 909 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 RPL9P32969 192 aaKnown RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 MCM4P33991 863 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 OR1D2P34982 312 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 GUCY2FP51841 1108 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 ASIC1P78348 528 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 KCNA1Q09470 495 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 KYAT1Q16773 422 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 SLFN12LQ6IEE8 588 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 GPR149Q86SP6 731 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 MAP4K3Q8IVH8 894 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 IQUBQ8NA54 791 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 KREMEN2Q8NCW0 462 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 LNX1Q8TBB1 728 aaPredicted RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 HPS3Q969F9 1004 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 ACCSQ96QU6 501 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 FIZ1Q96SL8 496 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 CLSTN3Q9BQT9 956 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 LRRC27Q9C0I9 530 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 SEL1LQ9UBV2 794 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 AGO2Q9UKV8 859 aaKnown RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 EXOC7Q9UPT5 735 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 PCDHB13Q9Y5F0 798 aa13.27□□□□□ -0.29
XRN1-204ENST00000465074 MORC2Q9Y6X9 1032 aaPredicted RBP13.27□□□□□ -0.29
XRN1-204ENST00000465074 TTC26A0AVF1 554 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 C2CD4DB7Z1M9 353 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 TMEM189-UBE2V1I3L0A0 370 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 PRPF6O94906 941 aaKnown RBP13.26□□□□□ -0.29
XRN1-204ENST00000465074 PIGRP01833 764 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 FGFR3P22607 806 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 AFMP43652 599 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 CASP5P51878 434 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 AMPD3Q01432 767 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 BECN1Q14457 450 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 AXDND1Q5T1B0 1012 aaPredicted RBP13.26□□□□□ -0.29
XRN1-204ENST00000465074 ATL3Q6DD88 541 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 JADE1Q6IE81 842 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 CD300LGQ6UXG3 332 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 TDRD5Q8NAT2 981 aaKnown RBP13.26□□□□□ -0.29
XRN1-204ENST00000465074 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
XRN1-204ENST00000465074 SPATA32Q96LK8 384 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 LRFN3Q9BTN0 628 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 BLZF1Q9H2G9 400 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 PLEKHA5Q9HAU0 1116 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 POLIQ9UNA4 740 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
XRN1-204ENST00000465074 GOLGA8IPA6NC78 632 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 GOLGA8JA6NMD2 632 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 XPOTO43592 962 aaKnown RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 CASP1P29466 404 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 GBP2P32456 591 aaPredicted RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 E2F4Q16254 413 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 L1TD1Q5T7N2 865 aaKnown RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 LIN9Q5TKA1 542 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 DSTYKQ6XUX3 929 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 CCDC149Q6ZUS6 474 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 ACSF2Q96CM8 615 aaPredicted RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 HVCN1Q96D96 273 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 SAAL1Q96ER3 474 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 FAM213AQ9BRX8 229 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 FGFBP2Q9BYJ0 223 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 TNMDQ9H2S6 317 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 CUEDC2Q9H467 287 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 PLEKHA4Q9H4M7 779 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 LIMD1Q9UGP4 676 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 RAPGEFL1Q9UHV5 662 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 CPSF3Q9UKF6 684 aaKnown RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 UBQLN1Q9UMX0 589 aaKnown RBP13.25□□□□□ -0.29
XRN1-204ENST00000465074 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
XRN1-204ENST00000465074 CCL16O15467 120 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 FAM189A1O60320 539 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 NFICP08651 508 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 COL9A1P20849 921 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 KRT85P78386 507 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 TMEM132DQ14C87 1099 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 POSTNQ15063 836 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 PPM1LQ5SGD2 360 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 LILRA6Q6PI73 481 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 RSPO2Q6UXX9 243 aaPredicted RBP13.24□□□□□ -0.29
XRN1-204ENST00000465074 STXBP4Q6ZWJ1 553 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 GPR65Q8IYL9 337 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 GRAMD1CQ8IYS0 662 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 GLIS3Q8NEA6 775 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 BEST2Q8NFU1 509 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 OLFML3Q9NRN5 406 aa13.24□□□□□ -0.29
XRN1-204ENST00000465074 KBTBD4Q9NVX7 518 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms