RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 GCLCP48506 637 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 PTDSS1P48651 473 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 MXI1P50539 228 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 PAPOLAP51003 745 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 MFAP3P55082 362 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 DLG4P78352 724 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 MXRA7P84157 204 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 RNASELQ05823 741 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 DNAJC3Q13217 504 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 BIRC2Q13490 618 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TNIP1Q15025 636 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 CCNG2Q16589 344 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 IZUMO3Q5VZ72 239 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ACAD10Q6JQN1 1059 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 SEPT14Q6ZU15 432 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 EGFL6Q8IUX8 553 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 LRRC8CQ8TDW0 803 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 FAM136AQ96C01 138 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ZBTB10Q96DT7 871 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ZNF333Q96JL9 665 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 FAM81BQ96LP2 452 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 KREMEN1Q96MU8 473 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TUBB6Q9BUF5 446 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 VCXQ9H320 206 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 CPSF2Q9P2I0 782 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 CHORDC1Q9UHD1 332 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 TBK1Q9UHD2 729 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ZMYND8Q9ULU4 1186 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP48-206ENST00000464577 EXOC1LA0A1B0GW35 172 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 FAM170AA1A519 330 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 C6orf229H3BNL8 230 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 NVLO15381 856 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 CYP26A1O43174 497 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 MYBL1P10243 752 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 EEF2P13639 858 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 CYP11B1P15538 503 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 SP100P23497 879 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 RRM1P23921 792 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 GCAP28676 217 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 EPHB2P29323 1055 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ADSSP30520 456 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 MAPK4P31152 587 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 VHLP40337 213 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 MAGEA4P43358 317 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 GCLMP48507 274 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 RAB27AP51159 221 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 OCRLQ01968 901 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 KLF1Q13351 362 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 ZRSR2Q15696 482 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 CLEC16AQ2KHT3 1053 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ZNF365Q70YC5 407 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ANKS1BQ7Z6G8 1248 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 SLC47A2Q86VL8 602 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 GALNT15Q8N3T1 639 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 XXYLT1Q8NBI6 393 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 SLC17A8Q8NDX2 589 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 GMCL1P1Q8NEA9 526 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 CYP2W1Q8TAV3 490 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 CERKQ8TCT0 537 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ATG4AQ8WYN0 398 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 KIFAP3Q92845 792 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 KAT5Q92993 513 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TRIM11Q96F44 468 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 DDX27Q96GQ7 796 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 GMCL1Q96IK5 515 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TRAPPC9Q96Q05 1148 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 ACCSQ96QU6 501 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 WDR11Q9BZH6 1224 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TMEM117Q9H0C3 514 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 TRABDQ9H4I3 376 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 DENND2DQ9H6A0 471 aaPredicted RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 PAPOLBQ9NRJ5 636 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 DNAJC17Q9NVM6 304 aaKnown RBP7.75□□□□□ -1.17
USP48-206ENST00000464577 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP48-206ENST00000464577 LRCH1Q9Y2L9 728 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 LTBP1Q14766 1721 aa7.75□□□□□ -1.17
USP48-206ENST00000464577 LRRC37AA6NMS7 1700 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 AHDC1Q5TGY3 1603 aaPredicted RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 ARHGEF35A5YM69 484 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SIGLEC16A6NMB1 481 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 F5H6K3 240 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 K7ENM7 598 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 NDC80O14777 642 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GNPATO15228 680 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 PSTPIP1O43586 416 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SMIM24O75264 130 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ZWINTO95229 277 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GSTA2P09210 222 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GNAT1P11488 350 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 KLRC2P26717 231 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TRIP13Q15645 432 aaPredicted RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 CCDC142Q17RM4 750 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 MUM1Q2TAK8 710 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 FYB2Q5VWT5 728 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 NSMFQ6X4W1 530 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 C4orf50Q6ZRC1 276 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms