RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 EFCAB14O75071 495 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 VNN1O95497 513 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 KRT19P08727 400 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 PON1P27169 355 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 BEST2Q8NFU1 509 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 NR2E3Q9Y5X4 410 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
SUPT20H-204ENST00000464572 HLA-DRAP01903 254 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 ITGB3P05106 788 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 PIK3CAP42336 1068 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 WDR5P61964 334 aaKnown RBP13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 APBA1Q02410 837 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 SOX4Q06945 474 aaPredicted RBP13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 NCOA4Q13772 614 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 NPAS4Q8IUM7 802 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 ABI1Q8IZP0 508 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 EHBP1Q8NDI1 1231 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 LMO3Q8TAP4 145 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 ELMO3Q96BJ8 720 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 GOLGA2P5Q9HBQ8 144 aa13.77□□□□□ -0.2
SUPT20H-204ENST00000464572 ZBBXA8MT70 800 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 XPOTO43592 962 aaKnown RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 BAIAP3O94812 1187 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 GATMP50440 423 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 DEFB103AP81534 67 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 TRPC3Q13507 836 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 TMEM240Q5SV17 173 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 SPC24Q8NBT2 197 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 PI4K2AQ9BTU6 479 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 INTS2Q9H0H0 1204 aaKnown RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 RNF216Q9NWF9 866 aaPredicted RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 SIX4Q9UIU6 781 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 AMHP03971 560 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 CDC25BP30305 580 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 LRMPQ12912 555 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 NOMO2Q5JPE7 1267 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
SUPT20H-204ENST00000464572 CLSTN1O94985 981 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 POLR2BP30876 1174 aaKnown RBP13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 KCNJ6P48051 423 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 MYL6P60660 151 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 NAB2Q15742 525 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 PSRC1Q6PGN9 363 aaPredicted RBP13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 CXorf38Q8TB03 319 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 TOP1MTQ969P6 601 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 AGAP1Q9UPQ3 857 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 EPHB6O15197 1021 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 INPPL1O15357 1258 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 HOXA2O43364 376 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 CYP3A5P20815 502 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 GRIK3Q13003 919 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 NEK11Q8NG66 645 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 CASD1Q96PB1 797 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 CACNG4Q9UBN1 327 aa13.76□□□□□ -0.21
SUPT20H-204ENST00000464572 ITIH6Q6UXX5 1313 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 RBP5P82980 135 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 DPY19L2P1Q6NXN4 242 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 TBC1D13Q9NVG8 400 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 WDR44Q5JSH3 913 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 KLHDC7AQ5VTJ3 777 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 CPLX3Q8WVH0 158 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.75□□□□□ -0.21
SUPT20H-204ENST00000464572 CASTOR2A6NHX0 329 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PPEF2O14830 753 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 NOL4O94818 638 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 C9orf57Q5W0N0 161 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PHLDB3Q6NSJ2 640 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ZNF280BQ86YH2 543 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 DGKIO75912 1065 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ASS1P00966 412 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 NOP14P78316 857 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 TUSC3Q13454 348 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms