RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 CASKIN2Q8WXE0 1202 aa13□□□□□ -0.33
SEC61A1-203ENST00000464451 RIN2Q8WYP3 895 aaPredicted RBP13□□□□□ -0.33
SEC61A1-203ENST00000464451 RUFY1Q96T51 708 aa13□□□□□ -0.33
SEC61A1-203ENST00000464451 SH3GL2Q99962 352 aa13□□□□□ -0.33
SEC61A1-203ENST00000464451 ESYT3A0FGR9 886 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA8IPA6NC78 632 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA8JA6NMD2 632 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA8KD6RF30 607 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 H3BRB1 525 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ARVCFO00192 962 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ZNF862O60290 1169 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 KPNA6O60684 536 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 STBD1O95210 358 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 SYN1P17600 705 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GTF2H1P32780 548 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ACTN2P35609 894 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PSEN2P49810 448 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 MFAP3P55082 362 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ENPEPQ07075 957 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 CUL1Q13616 776 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 MFSD10Q14728 455 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 CLUL1Q15846 466 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PTPROQ16827 1216 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 LEKR1Q6ZMV7 388 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 FAM71AQ8IYT1 594 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 MREGQ8N565 214 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GLG1Q92896 1179 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 MFSD14AQ96MC6 490 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PCYT2Q99447 389 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 THAP2Q9H0W7 228 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ISCUQ9H1K1 167 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TMEM8AQ9HCN3 771 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TAS2R14Q9NYV8 317 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 KCNG1Q9UIX4 513 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 COQ4Q9Y3A0 265 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA6CA6NDK9 693 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ZSCAN5CA6NGD5 496 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 H0YCG3 227 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 SART1O43290 800 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 F2P00734 622 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA6DP0CG33 693 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GPC3P51654 580 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PPFIA1Q13136 1202 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TSEN2Q8NCE0 465 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 FAM76AQ8TAV0 307 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 SLC20A1Q8WUM9 679 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 BSNDQ8WZ55 320 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ARHGEF26Q96DR7 871 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 KIFC3Q9BVG8 833 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 AP1M1Q9BXS5 423 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PRDM5Q9NQX1 630 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 PDLIM7Q9NR12 457 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 TRMT13Q9NUP7 481 aaKnown RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 GOLGA6AQ9NYA3 693 aa12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ZMYND8Q9ULU4 1186 aaPredicted RBP12.99□□□□□ -0.33
SEC61A1-203ENST00000464451 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 IGSF9BQ9UPX0 1349 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 RTN2O75298 545 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 GZMAP12544 262 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 USP8P40818 1118 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 CDK7P50613 346 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 MIS18BP1Q6P0N0 1132 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 ABHD15Q6UXT9 468 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 PPM1KQ8N3J5 372 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 C7orf31Q8N865 590 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 CCDC26Q8TAB7 109 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 POMGNT1Q8WZA1 660 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 SAAL1Q96ER3 474 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 NAP1L3Q99457 506 aaPredicted RBP12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 CARD9Q9H257 536 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 CYP26B1Q9NR63 512 aa12.98□□□□□ -0.33
SEC61A1-203ENST00000464451 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 B4GALT4O60513 344 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 RPS6KA5O75582 802 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 SUPT20HL2P0C7V6 817 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 GARTP22102 1010 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 GPC5P78333 572 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 PRKCEQ02156 737 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 HIC1Q14526 733 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 SNX17Q15036 470 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
SEC61A1-203ENST00000464451 C11orf63Q6NUN7 778 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms