RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 HPCAL4Q9UM19 191 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 CITO14578 2027 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 MANSC4A6NHS7 340 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 CEP104O60308 925 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 CLSTN1O94985 981 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 ITGBL1O95965 494 aaPredicted RBP23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 ACO1P21399 889 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 TNFRSF8P28908 595 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 IRF5Q13568 498 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 CLEC16AQ2KHT3 1053 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 MTHFD1LQ6UB35 978 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 RASAL3Q86YV0 1011 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 GOLGA6L1Q8N7Z2 621 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 FAN1Q9Y2M0 1017 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 B4GALT5O43286 388 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 CYP1A2P05177 515 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 ACTN2P35609 894 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 LMAN1P49257 510 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 HNRNPH2P55795 449 aaKnown RBP23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 DGKDQ16760 1214 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 PTPROQ16827 1216 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 MORN1Q5T089 497 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 EEF1DP3Q658K8 133 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 C8orf74Q6P047 294 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 RASGEF1CQ8N431 466 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 FAM212AQ96EL1 285 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 GTF3C4Q9UKN8 822 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 CNTN6Q9UQ52 1028 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 AKT3Q9Y243 479 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 NUB1Q9Y5A7 615 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 PCDHB4Q9Y5E5 795 aa23.28■■□□□ 1.32
PDLIM2-216ENST00000464275 IVLP07476 585 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 TNNT3P45378 269 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 MAP2K5Q13163 448 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 LEKR1Q6ZMV7 388 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 THNSL1Q8IYQ7 743 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 CDT1Q9H211 546 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 TMEM59LQ9UK28 342 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 A0A087WZ62 844 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 A0A0U1RQG5 324 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 ASS1P00966 412 aaKnown RBP23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF157P51786 506 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 TNFAIP2Q03169 654 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 PPFIA1Q13136 1202 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF653Q96CK0 615 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 FDXACB1Q9BRP7 624 aaPredicted RBP23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 NMRK2Q9NPI5 230 aa23.27■■□□□ 1.32
PDLIM2-216ENST00000464275 FAM170AA1A519 330 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 PGRMC1O00264 195 aaKnown RBP23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 IGF2BP3O00425 579 aaKnown RBP eCLIP23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 DDX3YO15523 660 aaKnown RBP23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 ZEB2O60315 1214 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 B4GALT4O60513 344 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 IL18RAPO95256 599 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 HOXC6P09630 235 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 TNNC1P63316 161 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 GRIK4Q16099 956 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 ZSCAN26Q16670 478 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 SMYD5Q6GMV2 418 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 AENQ8WTP8 325 aaKnown RBP23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.26■■□□□ 1.311e-6■■■■□ 19.3
PDLIM2-216ENST00000464275 MTMR12Q9C0I1 747 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 UVRAGQ9P2Y5 699 aa23.26■■□□□ 1.31
PDLIM2-216ENST00000464275 CST3P01034 146 aaPredicted RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 IQCF3P0C7M6 154 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 UNGP13051 313 aaPredicted RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 RNASE9P60153 205 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 TAF1CQ15572 869 aaPredicted RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 SGSM1Q2NKQ1 1148 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 CHADLQ6NUI6 762 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 RPF1Q9H9Y2 349 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 DMGDHQ9UI17 866 aaKnown RBP23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 ALG6Q9Y672 507 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 TNNC2P02585 160 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 TMEM191BP0C7N4 346 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 MCF2P10911 925 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 AMHR2Q16671 573 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 TRIM72Q6ZMU5 477 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 ANKRD36BP1Q96IX9 119 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 RPS6KC1Q96S38 1066 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 STIM2Q9P246 746 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 UMODL1Q5DID0 1318 aa23.25■■□□□ 1.31
PDLIM2-216ENST00000464275 MIF4GDA9UHW6 222 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 VTNP04004 478 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 POU5F1Q01860 360 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 TRPC3Q13507 836 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 EMBQ6PCB8 327 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 TMEM270Q6UE05 265 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 UBR7Q8N806 425 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 RBBP8NLQ8NC74 664 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 ZNF564Q8TBZ8 553 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 HDAC7Q8WUI4 952 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 NUP85Q9BW27 656 aa23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 TTC7AQ9ULT0 858 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 NOC2LQ9Y3T9 749 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-216ENST00000464275 RRN3P2A6NIE6 340 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 ZMYND10O75800 440 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CALCAP01258 141 aa23.23■■□□□ 1.31
PDLIM2-216ENST00000464275 CYP1A1P04798 512 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms