RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PAFAH1B1P43034 410 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 ACLYP53396 1101 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 MCCD1P59942 119 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-205ENST00000464187 MCL1Q07820 350 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 CYP24A1Q07973 514 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 PPP3CAQ08209 521 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 ZBTB41Q5SVQ8 909 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 PHLDB3Q6NSJ2 640 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 MPZL3Q6UWV2 235 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 CRELD2Q6UXH1 353 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-205ENST00000464187 ZBTB33Q86T24 672 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 CDR2LQ86X02 465 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-205ENST00000464187 LRRC57Q8N9N7 239 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 U2AF1L4Q8WU68 220 aaKnown RBP15.63■□□□□ 0.09
COL5A1-205ENST00000464187 VTI1AQ96AJ9 217 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 CCDC127Q96BQ5 260 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 OSMRQ99650 979 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 GCOM2Q9BZD3 368 aaPredicted RBP15.63■□□□□ 0.09
COL5A1-205ENST00000464187 CDHR5Q9HBB8 845 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 PDE11AQ9HCR9 933 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 PTPRHQ9HD43 1115 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 TNFSF13BQ9Y275 285 aa15.63■□□□□ 0.09
COL5A1-205ENST00000464187 GRIN2DO15399 1336 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 CNTNAP2Q9UHC6 1331 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 LRRIQ3A6PVS8 624 aaPredicted RBP15.62■□□□□ 0.09
COL5A1-205ENST00000464187 H2AFZP0C0S5 128 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 RFX1P22670 979 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 DNA2P51530 1060 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 CFAP221Q4G0U5 840 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 SEZ6Q53EL9 994 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 CCDC70Q6NSX1 233 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 H2AFVQ71UI9 128 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 SESTD1Q86VW0 696 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 GSPT2Q8IYD1 628 aaKnown RBP15.62■□□□□ 0.09
COL5A1-205ENST00000464187 RUBCNQ92622 972 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 LRRC1Q9BTT6 524 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.62■□□□□ 0.09
COL5A1-205ENST00000464187 RBM12Q9NTZ6 932 aaKnown RBP15.62■□□□□ 0.09
COL5A1-205ENST00000464187 RNF14Q9UBS8 474 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 INTUQ9ULD6 942 aa15.62■□□□□ 0.09
COL5A1-205ENST00000464187 A0A0A6YYK5 440 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 MOXD2PA6NHM9 499 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 P4HA2O15460 535 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 FAM189A1O60320 539 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 N4BP1O75113 896 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 CABYRO75952 493 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ERLIN2O94905 339 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 DLATP10515 647 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ARF4P18085 180 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 GCLMP48507 274 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 IFI16Q16666 785 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ARHGAP44Q17R89 818 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ZNF568Q3ZCX4 644 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 EEF1DP3Q658K8 133 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 CCNI2Q6ZMN8 369 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 USP37Q86T82 979 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 NME8Q8N427 588 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 TMC2Q8TDI7 906 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 HDAC7Q8WUI4 952 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 CPB2Q96IY4 423 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 POP1Q99575 1024 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 RBAKQ9NYW8 714 aaPredicted RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 NCANO14594 1321 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 OGTO15294 1046 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 TSPAN1O60635 241 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 DARSP14868 501 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 FGFR4P22455 802 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 NOP2P46087 812 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 FMNL3Q8IVF7 1028 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 GLYCTKQ8IVS8 523 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 ARHGEF19Q8IW93 802 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 GLT1D1Q96MS3 346 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 TSEN34Q9BSV6 310 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 UNC93B1Q9H1C4 597 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 GOLPH3Q9H4A6 298 aa15.61■□□□□ 0.09
COL5A1-205ENST00000464187 DMGDHQ9UI17 866 aaKnown RBP15.61■□□□□ 0.09
COL5A1-205ENST00000464187 LRRN2O75325 713 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 KIF4AO95239 1232 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 MYCP01106 439 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-205ENST00000464187 EIF4BP23588 611 aaKnown RBP15.6■□□□□ 0.09
COL5A1-205ENST00000464187 TNFSF9P41273 254 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
COL5A1-205ENST00000464187 GALCP54803 685 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
COL5A1-205ENST00000464187 ENPEPQ07075 957 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 PSMD6Q15008 389 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 SERINC5Q86VE9 423 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 ARRDC4Q8NCT1 418 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 TMEM40Q8WWA1 233 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 TMEM117Q9H0C3 514 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 CDT1Q9H211 546 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 PDZD7Q9H5P4 517 aa15.6■□□□□ 0.09
COL5A1-205ENST00000464187 A0A1B0GUA9 196 aa15.59■□□□□ 0.09
COL5A1-205ENST00000464187 FOXN3O00409 490 aaPredicted RBP15.59■□□□□ 0.09
COL5A1-205ENST00000464187 CES2O00748 559 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms