RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 Q6ZNX1 250 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 UBE3BQ7Z3V4 1068 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 FITM2Q8N6M3 262 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 CCHCR1Q8TD31 782 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 NTN5Q8WTR8 489 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-208ENST00000464001 MYOCQ99972 504 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 DUSP26Q9BV47 211 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 R3HDMLQ9H3Y0 253 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 FBXO34Q9NWN3 711 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 TLK1Q9UKI8 766 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 DMTF1Q9Y222 760 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 GPR45Q9Y5Y3 372 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 AATKQ6ZMQ8 1374 aa5.67□□□□□ -1.5
ITGB1-208ENST00000464001 ERN1O75460 977 aaKnown RBP5.66□□□□□ -1.5
ITGB1-208ENST00000464001 VIL1P09327 827 aaKnown RBP5.66□□□□□ -1.5
ITGB1-208ENST00000464001 PCSK1P29120 753 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 LHFPL2Q6ZUX7 228 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 AMOTL1Q8IY63 956 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
ITGB1-208ENST00000464001 ATL2Q8NHH9 583 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 NUP133Q8WUM0 1156 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 PNKPQ96T60 521 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 C7orf25Q9BPX7 421 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 CHMP4AQ9BY43 222 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 TMX1Q9H3N1 280 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 GSTO2Q9H4Y5 243 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 LRIT1Q9P2V4 623 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
ITGB1-208ENST00000464001 MYADML2A6NDP7 307 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 PRSS23O95084 383 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 DDCP20711 480 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 CREMQ03060 361 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 MTM1Q13496 603 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 ZNF169Q14929 603 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 CYP2A13Q16696 494 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 NLGN4YQ8NFZ3 816 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 PTCD3Q96EY7 689 aaKnown RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 MARS2Q96GW9 593 aaKnown RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 MED15Q96RN5 788 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 PRDM13Q9H4Q3 707 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 USP25Q9UHP3 1055 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
ITGB1-208ENST00000464001 PRKAB1Q9Y478 270 aa5.65□□□□□ -1.5
ITGB1-208ENST00000464001 CCDC78A2IDD5 438 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 K7ESF4 209 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 AMY1AP04745 511 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 AGXTP21549 392 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 PTH2RP49190 550 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 RARRES1P49788 294 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 VAV2P52735 878 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 ERVK-21P61565 698 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 OR2I1PQ8NGU4 316 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 COG1Q8WTW3 980 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 SSH1Q8WYL5 1049 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 NACC2Q96BF6 587 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 AIFM2Q9BRQ8 373 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 UNKLQ9H9P5 680 aaKnown RBP5.64□□□□□ -1.51
ITGB1-208ENST00000464001 KIAA1586Q9HCI6 787 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
ITGB1-208ENST00000464001 ZNF277Q9NRM2 450 aaPredicted RBP5.64□□□□□ -1.51
ITGB1-208ENST00000464001 MYBBP1AQ9BQG0 1328 aaKnown RBP5.64□□□□□ -1.51
ITGB1-208ENST00000464001 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
ITGB1-208ENST00000464001 TCRBV7S2A1N4TA0A589 114 aa5.63□□□□□ -1.51
ITGB1-208ENST00000464001 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 IL12RB1P42701 662 aa5.63□□□□□ -1.51
ITGB1-208ENST00000464001 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 MRPS35P82673 323 aaKnown RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 KLF1Q13351 362 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 ZGPATQ8N5A5 531 aaKnown RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 FAM98AQ8NCA5 519 aaKnown RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 TBC1D15Q8TC07 691 aa5.63□□□□□ -1.51
ITGB1-208ENST00000464001 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
ITGB1-208ENST00000464001 SPATA5L1Q9BVQ7 753 aa5.63□□□□□ -1.51
ITGB1-208ENST00000464001 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
ITGB1-208ENST00000464001 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 C1RP00736 705 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 ZNF37AP17032 561 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-208ENST00000464001 LMO1P25800 156 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 WASP42768 502 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 NOMO3P69849 1222 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 ATP8B2P98198 1209 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 NOMO2Q5JPE7 1267 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 DACT2Q5SW24 774 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 RHOT1Q8IXI2 618 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 LNX2Q8N448 690 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 NRG4Q8WWG1 115 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 DPF2Q92785 391 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 LRFN3Q9BTN0 628 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 C11orf54Q9H0W9 315 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-208ENST00000464001 KCTD5Q9NXV2 234 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 INTUQ9ULD6 942 aa5.62□□□□□ -1.51
ITGB1-208ENST00000464001 TRGV11A0A075B6L2 103 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 TRIM75PA6NK02 468 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 IGLV2-14P01704 120 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 CACNA2D1P54289 1103 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 CTXN1P60606 82 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 CLUL1Q15846 466 aa5.61□□□□□ -1.51
ITGB1-208ENST00000464001 COLEC12Q5KU26 742 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms