RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PPM1LQ5SGD2 360 aa22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 AXDND1Q5T1B0 1012 aaPredicted RBP22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 LARP4BQ92615 738 aaKnown RBP22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 IRF2BPLQ9H1B7 796 aa22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 TBX20Q9UMR3 447 aa22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 PDCD11Q14690 1871 aaKnown RBP22.43■■□□□ 1.18
PDLIM4-205ENST00000463615 FAM189A1O60320 539 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 XYLBO75191 536 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 ABLIM3O94929 683 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 CYP3A5P20815 502 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 SYT1P21579 422 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 DDIT3P35638 169 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 MCM6Q14566 821 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 ZBTB6Q15916 424 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 ZNF461Q8TAF7 563 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 C18orf25Q96B23 403 aaPredicted RBP22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 SUSD3Q96L08 255 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 ST6GALNAC4Q9H4F1 302 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 FBXO2Q9UK22 296 aaPredicted RBP22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 SRPRBQ9Y5M8 271 aaKnown RBP22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 CLIC4Q9Y696 253 aa22.42■■□□□ 1.18
PDLIM4-205ENST00000463615 I3L4J1 428 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 TRAK2O60296 914 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 FAM13AO94988 1023 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 HARSP12081 509 aaKnown RBP22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 FSHRP23945 695 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 LRPAP1P30533 357 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 GTF2BQ00403 316 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 VARS2Q5ST30 1063 aaKnown RBP22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 ASTLQ6HA08 431 aaPredicted RBP22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 SLC44A3Q8N4M1 653 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 MYCT1Q8N699 235 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 SLC7A14Q8TBB6 771 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 WNT16Q9UBV4 365 aa22.41■■□□□ 1.18
PDLIM4-205ENST00000463615 ARHGEF37A1IGU5 675 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 H7C4K7 107 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 CXCL8P10145 99 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 LIG4P49917 911 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 ROR1Q01973 937 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 HTR4Q13639 388 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 SEZ6Q53EL9 994 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 GET4Q7L5D6 327 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 GRASPQ7Z6J2 395 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 MAP4K3Q8IVH8 894 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 TMEM105Q8N8V8 129 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 AVENQ9NQS1 362 aaPredicted RBP22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 STK17AQ9UEE5 414 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 CDH7Q9ULB5 785 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 KCNH3Q9ULD8 1083 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 NUB1Q9Y5A7 615 aa22.4■■□□□ 1.18
PDLIM4-205ENST00000463615 A0A0B4J269 797 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 K7ENM7 598 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 HNRNPDLO14979 420 aaKnown RBP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 OGTO15294 1046 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 GALR2O43603 387 aaPredicted RBP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 SRFP11831 508 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 NPR3P17342 541 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 AARSP49588 968 aaKnown RBP eCLIP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 MRE11P49959 708 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 DHX8Q14562 1220 aaKnown RBP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 ALYREFQ86V81 257 aaKnown RBP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 RASSF8Q8NHQ8 419 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 RSAD2Q8WXG1 361 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 BICD1Q96G01 975 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 EPSTI1Q96J88 318 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 MAFFQ9ULX9 164 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 UBQLN1Q9UMX0 589 aaKnown RBP22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 DOCK6Q96HP0 2047 aa22.39■■□□□ 1.17
PDLIM4-205ENST00000463615 M0QZQ0 153 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 CCL16O15467 120 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 TBCAO75347 108 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 KRT18P05783 430 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 ATF2P15336 505 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 POU5F1Q01860 360 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 TPGS2Q68CL5 300 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 CWF19L1Q69YN2 538 aaKnown RBP22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 USP49Q70CQ1 688 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 CD302Q8IX05 232 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 TCEAL8Q8IYN2 117 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 APPL2Q8NEU8 664 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 SLC2A4RGQ9NR83 387 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 CCDC39Q9UFE4 941 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 TUBGCP4Q9UGJ1 667 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 PCDHB8Q9UN66 801 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 MTMR6Q9Y217 621 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 STYXL1Q9Y6J8 313 aa22.38■■□□□ 1.17
PDLIM4-205ENST00000463615 WDR27A2RRH5 827 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 NARSO43776 548 aaKnown RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 AOC1P19801 751 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 PPP2R3AQ06190 1150 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 ENOX2Q16206 610 aaKnown RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 SLC39A4Q6P5W5 647 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 DDX12PQ92771 950 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 OXCT2Q9BYC2 517 aaPredicted RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 MFSD1Q9H3U5 465 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 ZSCAN16Q9H4T2 348 aaPredicted RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 DNMT3BQ9UBC3 853 aaKnown RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 FBXL5Q9UKA1 691 aa22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 CPSF3Q9UKF6 684 aaKnown RBP22.37■■□□□ 1.17
PDLIM4-205ENST00000463615 NOTCH4Q99466 2003 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms