RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 CLDND1Q9NY35 253 aa19.23■□□□□ 0.67
VPS52-214ENST00000463486 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.22■□□□□ 0.67
VPS52-214ENST00000463486 GOLGA8IPA6NC78 632 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 GOLGA8JA6NMD2 632 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 PODXLO00592 558 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 B3GAT3O94766 335 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 NFICP08651 508 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 CNPP09543 421 aaKnown RBP19.22■□□□□ 0.67
VPS52-214ENST00000463486 KCNA5P22460 613 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 GUCY2FP51841 1108 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 USP41Q3LFD5 358 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 RTP2Q5QGT7 225 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 EFCAB13Q8IY85 973 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.22■□□□□ 0.67
VPS52-214ENST00000463486 SLC22A17Q8WUG5 538 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 TMEM174Q8WUU8 243 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 PPP2R3CQ969Q6 453 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 KLHL5Q96PQ7 755 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 ASB2Q96Q27 587 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 HSPBP1Q9NZL4 362 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 UBQLN1Q9UMX0 589 aaKnown RBP19.22■□□□□ 0.67
VPS52-214ENST00000463486 DERAQ9Y315 318 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 SF3B1O75533 1304 aaKnown RBP eCLIP19.22■□□□□ 0.67
VPS52-214ENST00000463486 C5orf42Q9H799 3197 aa19.22■□□□□ 0.67
VPS52-214ENST00000463486 NCOR1O75376 2440 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 MUC3AQ02505 3323 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 H3BQ06 376 aaPredicted RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 KIAA0391O15091 583 aaKnown RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 BMP1P13497 986 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 FGFR3P22607 806 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 BRCC3P46736 316 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 GLUD2P49448 558 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 SNRPFP62306 86 aaKnown RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 MRPS5P82675 430 aaKnown RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 LEXMQ3ZCV2 418 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 FAM171A1Q5VUB5 890 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 ARMCX5Q6P1M9 558 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 CBWD2Q8IUF1 395 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 LNX1Q8TBB1 728 aaPredicted RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 MRPL17Q9NRX2 175 aaKnown RBP19.21■□□□□ 0.67
VPS52-214ENST00000463486 C2CD2Q9Y426 696 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 VWA8A3KMH1 1905 aa19.21■□□□□ 0.67
VPS52-214ENST00000463486 I3L4J1 428 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 PPEF2O14830 753 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 CLIC2O15247 247 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 TEX28O15482 410 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 KCNQ1P51787 676 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 SCARA3Q6AZY7 606 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 GPD1LQ8N335 351 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 CXorf38Q8TB03 319 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 ERCC4Q92889 916 aaPredicted RBP19.2■□□□□ 0.66
VPS52-214ENST00000463486 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 GZF1Q9H116 711 aaPredicted RBP19.2■□□□□ 0.66
VPS52-214ENST00000463486 DMAC2Q9NW81 257 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 PCDHA5Q9Y5H7 936 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 HCFC2Q9Y5Z7 792 aa19.2■□□□□ 0.66
VPS52-214ENST00000463486 ANO9A1A5B4 782 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 PIRO00625 290 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 C2CD2LO14523 706 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 PRPF40AO75400 957 aaKnown RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 IL18RAPO95256 599 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 URODP06132 367 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 AARSP49588 968 aaKnown RBP eCLIP19.19■□□□□ 0.66
VPS52-214ENST00000463486 UBE2HP62256 183 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 BMS1Q14692 1282 aaKnown RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 RIN2Q8WYP3 895 aaPredicted RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 PIK3R5Q8WYR1 880 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 FAM84AQ96KN4 292 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 TTPALQ9BTX7 342 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 RBAKQ9NYW8 714 aaPredicted RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 FNIP2Q9P278 1114 aa19.19■□□□□ 0.66
VPS52-214ENST00000463486 CGNQ9P2M7 1197 aaKnown RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 BARX2Q9UMQ3 279 aaPredicted RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.19■□□□□ 0.66
VPS52-214ENST00000463486 PDXKO00764 312 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 EPCAMP16422 314 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 CLCN4P51793 760 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 ELAVL2Q12926 359 aaKnown RBP19.18■□□□□ 0.66
VPS52-214ENST00000463486 TMEM132DQ14C87 1099 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 C9orf57Q5W0N0 161 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 SYCE2Q6PIF2 218 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 PRSS55Q6UWB4 352 aaPredicted RBP19.18■□□□□ 0.66
VPS52-214ENST00000463486 RSPO2Q6UXX9 243 aaPredicted RBP19.18■□□□□ 0.66
VPS52-214ENST00000463486 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.18■□□□□ 0.66
VPS52-214ENST00000463486 SUSD3Q96L08 255 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 GSDMAQ96QA5 445 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 CLSTN3Q9BQT9 956 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 S1PR5Q9H228 398 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 SSX2IPQ9Y2D8 614 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 PTPRJQ12913 1337 aa19.18■□□□□ 0.66
VPS52-214ENST00000463486 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 ZNF233A6NK53 670 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 M0QZQ0 153 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 SPTLC1O15269 473 aa19.17■□□□□ 0.66
VPS52-214ENST00000463486 ADAM12O43184 909 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms