RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CES2O00748 559 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 GLI1P08151 1106 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 CXCL8P10145 99 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
VAPB-203ENST00000463370 ITGA4P13612 1032 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ZNF157P51786 506 aaPredicted RBP13.74□□□□□ -0.21
VAPB-203ENST00000463370 TFAMQ00059 246 aaKnown RBP13.74□□□□□ -0.21
VAPB-203ENST00000463370 CCL14Q16627 93 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 MORN1Q5T089 497 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 RHOT2Q8IXI1 618 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ZNF653Q96CK0 615 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 PBKQ96KB5 322 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 PCDHB4Q9Y5E5 795 aa13.74□□□□□ -0.21
VAPB-203ENST00000463370 ATP8B1O43520 1251 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 ASS1P00966 412 aaKnown RBP13.73□□□□□ -0.21
VAPB-203ENST00000463370 CYP1A2P05177 515 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 HADHBP55084 474 aaKnown RBP13.73□□□□□ -0.21
VAPB-203ENST00000463370 PPFIA1Q13136 1202 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 GRIK4Q16099 956 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 ACAD10Q6JQN1 1059 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 PASD1Q8IV76 773 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 KLHL7Q8IXQ5 586 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 ACTRT1Q8TDG2 376 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 KRT35Q92764 455 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 NUP85Q9BW27 656 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 TNFSF13BQ9Y275 285 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 NR2E1Q9Y466 385 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 PCDHB2Q9Y5E7 798 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 ESYT3A0FGR9 886 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 SLC15A5A6NIM6 579 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 ASAP2O43150 1006 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 TUBBP07437 444 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 HOXD8P13378 290 aaPredicted RBP13.73□□□□□ -0.21
VAPB-203ENST00000463370 ZNF211Q13398 564 aaPredicted RBP13.73□□□□□ -0.21
VAPB-203ENST00000463370 MESDQ14696 234 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 CASP8Q14790 479 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 TCEAL1Q15170 157 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 TRADDQ15628 312 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 RASGEF1CQ8N431 466 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 CYFIP2Q96F07 1278 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 NFKBIZQ9BYH8 718 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 TRIM7Q9C029 511 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 SETD4Q9NVD3 440 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 STIM2Q9P246 746 aa13.73□□□□□ -0.21
VAPB-203ENST00000463370 DYNC1LI2O43237 492 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 FGFR4P22455 802 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 CYP2C19P33261 490 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 PHKA2P46019 1235 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 GRM1Q13255 1194 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 NAA35Q5VZE5 725 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 OLFML2BQ68BL8 750 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 KIAA0319LQ8IZA0 1049 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 UBR7Q8N806 425 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 RBBP8NLQ8NC74 664 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 ZNF564Q8TBZ8 553 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
VAPB-203ENST00000463370 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 CEP350Q5VT06 3117 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 PGRMC1O00264 195 aaKnown RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 MAGEB2O15479 319 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 RAD51CO43502 376 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 NFICP08651 508 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 ARF4P18085 180 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 CD58P19256 250 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 COMTP21964 271 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 GNA15P30679 374 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 TNFAIP2Q03169 654 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 TMEM62Q0P6H9 643 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 TAF1CQ15572 869 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 C11orf63Q6NUN7 778 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 SCARA5Q6ZMJ2 495 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 HDXQ7Z353 690 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 XYLT2Q9H1B5 865 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 PRMT7Q9NVM4 692 aaPredicted RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 CNOT8Q9UFF9 292 aaKnown RBP13.72□□□□□ -0.21
VAPB-203ENST00000463370 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
VAPB-203ENST00000463370 H3BQF6 201 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 MTA2O94776 668 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 STAG3L1P0CL83 205 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 MAP2K5Q13163 448 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 HIC1Q14526 733 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 DGKDQ16760 1214 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 IQSEC1Q6DN90 963 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 NLRP7Q8WX94 980 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 FAM81BQ96LP2 452 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 ZSWIM1Q9BR11 485 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 SELENOOQ9BVL4 669 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 CNTN6Q9UQ52 1028 aa13.71□□□□□ -0.21
VAPB-203ENST00000463370 GNEQ9Y223 722 aaKnown RBP13.71□□□□□ -0.21
VAPB-203ENST00000463370 HTTP42858 3142 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 B4GALT4O60513 344 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 FGGP02679 453 aa13.71□□□□□ -0.22
VAPB-203ENST00000463370 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms