RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 MPZL3Q6UWV2 235 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 TMEM192Q8IY95 271 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 THNSL1Q8IYQ7 743 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 UBR7Q8N806 425 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 C2orf69Q8N8R5 385 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CASKIN2Q8WXE0 1202 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CPA5Q8WXQ8 436 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CD101Q93033 1021 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 MAML3Q96JK9 1138 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CALR3Q96L12 384 aaKnown RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 MTMR12Q9C0I1 747 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 VIPAS39Q9H9C1 493 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 KRIT1O00522 736 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 ADCY6O43306 1168 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 ASS1P00966 412 aaKnown RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 HOXC6P09630 235 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 SMPD1P17405 629 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 PEX5P50542 639 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 MYL6P60660 151 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 TERF2Q15554 542 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CST9Q5W186 159 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 DPP9Q86TI2 863 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 ZNF677Q86XU0 584 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 EFCAB13Q8IY85 973 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 MCOLN2Q8IZK6 566 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 CYFIP2Q96F07 1278 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 RPS6KC1Q96S38 1066 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 PPP1R16BQ96T49 567 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 DDX47Q9H0S4 455 aaKnown RBP10.89□□□□□ -0.67
MSH5-211ENST00000463144 CDT1Q9H211 546 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 CARD9Q9H257 536 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
MSH5-211ENST00000463144 A0A087WZ62 844 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 GPR25O00155 361 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 MEFVO15553 781 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 SART1O43290 800 aaKnown RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 FGGP02679 453 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 CYP1A1P04798 512 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 AP3M2P53677 418 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 BPIFB4P59827 614 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 OSTNP61366 133 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 AMHR2Q16671 573 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 LLGL2Q6P1M3 1020 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 TMEM270Q6UE05 265 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 IFT20Q8IY31 132 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 RNPC3Q96LT9 517 aaKnown RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 FDXACB1Q9BRP7 624 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 TINF2Q9BSI4 451 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 NFKBIZQ9BYH8 718 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 CNOT8Q9UFF9 292 aaKnown RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 CCDC188H7C350 402 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 FAM153BP0C7A2 387 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 ZNF132P52740 706 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 EPHB4P54760 987 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 POU5F1Q01860 360 aaKnown RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 DUOXA2Q1HG44 320 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 ZNF568Q3ZCX4 644 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 FAM153CQ494X1 144 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 DUSP28Q4G0W2 176 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 C2CD6Q53TS8 623 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 MARCH8Q5T0T0 291 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 NAA35Q5VZE5 725 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
MSH5-211ENST00000463144 PHLDB2Q86SQ0 1253 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 IFNLR1Q8IU57 520 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 RBBP8NLQ8NC74 664 aaPredicted RBP10.88□□□□□ -0.67
MSH5-211ENST00000463144 ZSWIM1Q9BR11 485 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 UVRAGQ9P2Y5 699 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 FAM153AQ9UHL3 310 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 NFU1Q9UMS0 254 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 TNFSF13BQ9Y275 285 aa10.88□□□□□ -0.67
MSH5-211ENST00000463144 MIF4GDA9UHW6 222 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 H3BRB1 525 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 AGPSO00116 658 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 B4GALT4O60513 344 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 ECM2O94769 699 aaPredicted RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 SYF2O95926 243 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 VTNP04004 478 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 TBXAS1P24557 533 aaPredicted RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 GNA15P30679 374 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 AARSP49588 968 aaKnown RBP eCLIP10.87□□□□□ -0.672e-6■■■■■ 67
MSH5-211ENST00000463144 GYS2P54840 703 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 CENPCQ03188 943 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 POU5F1BQ06416 359 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 ACVR2BQ13705 512 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 TSEN2Q8NCE0 465 aaKnown RBP10.87□□□□□ -0.67
MSH5-211ENST00000463144 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
MSH5-211ENST00000463144 PARK7Q99497 189 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms