RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CNTN2Q02246 1040 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 NNTQ13423 1086 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 MAFO75444 373 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 INHBAP08476 426 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 SERPINB6P35237 376 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 ARL4CP56559 192 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 ELMOD1Q8N336 334 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 SLC35G2Q8TBE7 412 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 APBA2Q99767 749 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PPANQ9NQ55 473 aaKnown RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 DPP3Q9NY33 737 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 A0A0G2JLL6 359 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 HMGB1P1B2RPK0 211 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 GIPC1O14908 333 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PPP1R11O60927 126 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 NPTXRO95502 500 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 CPP00450 1065 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 STX2P32856 288 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 VPS41P49754 854 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 DHX9Q08211 1270 aaKnown RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 ASPHQ12797 758 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 SNX17Q15036 470 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PRRT2Q7Z6L0 340 aaPredicted RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 CCDC13Q8IYE1 715 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 SLC35C1Q96A29 364 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
RBM39-223ENST00000463004 EFCC1Q9HA90 598 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PPCSQ9HAB8 311 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 CLCN3P51790 818 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 MTF1Q14872 753 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 ARHGAP18Q8N392 663 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 TTC1Q99614 292 aa12.47□□□□□ -0.41
RBM39-223ENST00000463004 SIPA1L3O60292 1781 aaPredicted RBP12.46□□□□□ -0.41
RBM39-223ENST00000463004 TROVE2P10155 538 aaKnown RBP eCLIP12.46□□□□□ -0.41
RBM39-223ENST00000463004 ITPRIPL1Q6GPH6 555 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 CCNYQ8ND76 341 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 SPATA4Q8NEY3 305 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 RNPC3Q96LT9 517 aaKnown RBP12.46□□□□□ -0.41
RBM39-223ENST00000463004 BTAF1O14981 1849 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
RBM39-223ENST00000463004 LGALS2P05162 132 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 PSEN2P49810 448 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 TLK2Q86UE8 772 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 PFDN4Q9NQP4 134 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 KANSL3Q9P2N6 904 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 RSPH14Q9UHP6 348 aa12.46□□□□□ -0.41
RBM39-223ENST00000463004 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.41
RBM39-223ENST00000463004 APOEP02649 317 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 SPATA31C1P0DKV0 1188 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 MFSD10Q14728 455 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 IL17AQ16552 155 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 MEA1Q16626 185 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 PTPROQ16827 1216 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 LY6KQ17RY6 165 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 SLC27A1Q6PCB7 646 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 KCNK18Q7Z418 384 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 ATL2Q8NHH9 583 aa12.46□□□□□ -0.42
RBM39-223ENST00000463004 F8VZ95 297 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 TADA3O75528 432 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 NOVP48745 357 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CASP4P49662 377 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 YWHAGP61981 247 aaKnown RBP eCLIP12.45□□□□□ -0.42
RBM39-223ENST00000463004 ELAVL2Q12926 359 aaKnown RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 COLEC11Q9BWP8 271 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 SLC8A2Q9UPR5 921 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 USP27XA6NNY8 438 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 PSMD3O43242 534 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ODC1P11926 461 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 NCKAP1LP55160 1127 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CENPCQ03188 943 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 EVX2Q03828 476 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 NFRKBQ6P4R8 1299 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 SPATA2LQ8IUW3 424 aaPredicted RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 FRMD8Q9BZ67 464 aaPredicted RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 INTS13Q9NVM9 706 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 TACC3Q9Y6A5 838 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ANKRD36CQ5JPF3 1778 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 BCAR1P56945 870 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 MTA1Q13330 715 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 CASP8Q14790 479 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 LMBRD2Q68DH5 695 aaPredicted RBP12.45□□□□□ -0.42
RBM39-223ENST00000463004 NDUFAF2Q8N183 169 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 PARD3BQ8TEW8 1205 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 EPAS1Q99814 870 aa12.45□□□□□ -0.42
RBM39-223ENST00000463004 ZCCHC17Q9NP64 241 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms