RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 POU5F1BQ06416 359 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 SMC1AQ14683 1233 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 SPOPLQ6IQ16 392 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 LRRC57Q8N9N7 239 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RFFLQ8WZ73 363 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 ARHGEF26Q96DR7 871 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RPGRIP1Q96KN7 1286 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PCDHB18PQ96TA0 734 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RHOXF2Q9BQY4 288 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 FUT8Q9BYC5 575 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 ANKZF1Q9H8Y5 726 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PTPRHQ9HD43 1115 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PRMT7Q9NVM4 692 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CPSF3Q9UKF6 684 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PACSIN2Q9UNF0 486 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 HTTP42858 3142 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CCDC151A5D8V7 595 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 HAS3O00219 553 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CLSTN1O94985 981 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 C6orf222P0C671 652 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CYP11B1P15538 503 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 CDR2LQ86X02 465 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 THNSL1Q8IYQ7 743 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 KIAA0319LQ8IZA0 1049 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 APOBEC3GQ9HC16 384 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RNF186Q9NXI6 227 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 ZEB2O60315 1214 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 MMEP08473 750 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 YY1P25490 414 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 AP3M2P53677 418 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
HDAC6-213ENST00000462730 FMO1Q01740 532 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 NCOA4Q13772 614 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 CCDC181Q5TID7 509 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 MSANTD4Q8NCY6 345 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 SCLT1Q96NL6 688 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 KATNAL1Q9BW62 490 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 THAP2Q9H0W7 228 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 CDT1Q9H211 546 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 SMARCAL1Q9NZC9 954 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 TNFSF13BQ9Y275 285 aa15.54■□□□□ 0.08
HDAC6-213ENST00000462730 MBLAC1A4D2B0 266 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 FTLP02792 175 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 ELNP15502 786 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 OSTNP61366 133 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CDR2Q01850 454 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CACNB2Q08289 660 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 C2orf54Q08AI8 447 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 HIC1Q14526 733 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 BRD3Q15059 726 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 SURF1Q15526 300 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 FAM187BQ17R55 369 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 ZNF572Q7Z3I7 529 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 SLC35G2Q8TBE7 412 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CD99L2Q8TCZ2 262 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 TAF4BQ92750 862 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 MTMR12Q9C0I1 747 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 FAM49AQ9H0Q0 323 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 ISCUQ9H1K1 167 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 OSGEPQ9NPF4 335 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 EHD2Q9NZN4 543 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 BRCA2P51587 3418 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 SEPT4O43236 478 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 RTN2O75298 545 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CALCAP01258 141 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CLTAP09496 248 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 VEGFBP49765 207 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 GJA9P57773 515 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 NOP14P78316 857 aaKnown RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 HTRA3P83110 453 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CUL2Q13617 745 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 RPS6KA1Q15418 735 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 AMHR2Q16671 573 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 PTPROQ16827 1216 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 LONRF2Q1L5Z9 754 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 SYCE1Q8N0S2 351 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 CEP120Q8N960 986 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 PNKPQ96T60 521 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
HDAC6-213ENST00000462730 THSD7BQ9C0I4 1608 aa15.53■□□□□ 0.08
HDAC6-213ENST00000462730 UMODL1Q5DID0 1318 aa15.52■□□□□ 0.08
HDAC6-213ENST00000462730 KIF4AO95239 1232 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 PGK1P00558 417 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 PRKAR2AP13861 404 aaKnown RBP15.52■□□□□ 0.07
HDAC6-213ENST00000462730 MAP2K2P36507 400 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 PAFAH1B1P43034 410 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 TMEM62Q0P6H9 643 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 SLFN11Q7Z7L1 901 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 DAAM2Q86T65 1068 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 ZNF410Q86VK4 478 aa15.52■□□□□ 0.07
HDAC6-213ENST00000462730 DDX1Q92499 740 aaKnown RBP15.52■□□□□ 0.07
HDAC6-213ENST00000462730 NUB1Q9Y5A7 615 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms