RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 CALCRLQ16602 461 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 ATL3Q6DD88 541 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 MIS18BP1Q6P0N0 1132 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 ANO5Q75V66 913 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 C3orf58Q8NDZ4 430 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 CAGE1Q8TC20 777 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 FAM167AQ96KS9 214 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 POLR3CQ9BUI4 534 aaPredicted RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 EMILIN2Q9BXX0 1053 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 TRPV6Q9H1D0 765 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 WNT8AQ9H1J5 351 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 DHX33Q9H6R0 707 aaKnown RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 TTC12Q9H892 705 aaPredicted RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 TRMT13Q9NUP7 481 aaKnown RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 PCDHA12Q9UN75 941 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 PCDHA2Q9Y5H9 948 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 SQORQ9Y6N5 450 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 SMIM35A0A1B0GVV1 85 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 DCDC2CA8MYV0 355 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 H0YGN5 161 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 LEFTY1O75610 366 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 PARNO95453 639 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 F13A1P00488 732 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 P4HBP07237 508 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 CD8BP10966 210 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 INSRRP14616 1297 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 MCM7P33993 719 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 QARSP47897 775 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 OXCT1P55809 520 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 PSMC5P62195 406 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 BNIP3Q12983 259 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 FZD5Q13467 585 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 SLC39A14Q15043 492 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 IFI16Q16666 785 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 XKR3Q5GH77 459 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 ZNF484Q5JVG2 852 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 FAM160B1Q5W0V3 765 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 MFSD5Q6N075 450 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 SWSAP1Q6NVH7 229 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 TAF2Q6P1X5 1199 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 C16orf59Q7L2K0 433 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 CATSPER3Q86XQ3 398 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 FAM181AQ8N9Y4 354 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 LINC00301Q8NCQ3 95 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 ATP6V0A1Q93050 837 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 ISL2Q96A47 359 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 AK8Q96MA6 479 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 TUFT1Q9NNX1 390 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 ZNF302Q9NR11 478 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 DBR1Q9UK59 544 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 NOL7Q9UMY1 257 aaKnown RBP6.42□□□□□ -1.38
VPS36-202ENST00000462289 NR2E3Q9Y5X4 410 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 MYO9BQ13459 2157 aa6.42□□□□□ -1.38
VPS36-202ENST00000462289 FNDC1Q4ZHG4 1894 aaPredicted RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 FAM237AA0A1B0GTK4 181 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 C17orf102A2RUQ5 167 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 H3BQV1 296 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 PQBP1O60828 265 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 RNGTTO60942 597 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 MED24O75448 989 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 BAG4O95429 457 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 YEATS4O95619 227 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 CEACAM5P06731 702 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 IQCF3P0C7M6 154 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 GNAT1P11488 350 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 CKBP12277 381 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 RFC2P35250 354 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ZNF200P98182 395 aaPredicted RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 PRKCEQ02156 737 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 PPFIA1Q13136 1202 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ZNF174Q15697 407 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 PTGISQ16647 500 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS36-202ENST00000462289 TMEM119Q4V9L6 283 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 AXDND1Q5T1B0 1012 aaPredicted RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 MTHFD1LQ6UB35 978 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 MIER3Q7Z3K6 550 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 KIAA0319LQ8IZA0 1049 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 GPBAR1Q8TDU6 330 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 LRRC15Q8TF66 581 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 TNPO1Q92973 898 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 NECAB3Q96P71 396 aaPredicted RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 USP28Q96RU2 1077 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 EIF2AK1Q9BQI3 630 aaKnown RBP6.41□□□□□ -1.38
VPS36-202ENST00000462289 LXNQ9BS40 222 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 CCSER1Q9C0I3 900 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 AZI2Q9H6S1 392 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ZSWIM4Q9H7M6 989 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 ANKEF1Q9NU02 776 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 SETD4Q9NVD3 440 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 RGL1Q9NZL6 768 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 GABBR1Q9UBS5 961 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 TUBE1Q9UJT0 475 aa6.41□□□□□ -1.38
VPS36-202ENST00000462289 FBXO2Q9UK22 296 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms