RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 KIF26AQ9ULI4 1882 aaPredicted RBP16.11■□□□□ 0.17
SMPD4-216ENST00000461187 COL4A2P08572 1712 aa16.11■□□□□ 0.17
SMPD4-216ENST00000461187 SFI1A8K8P3 1242 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 PODXLO00592 558 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 GUCY2CP25092 1073 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 ROR1Q01973 937 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 C8orf34Q49A92 452 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 PABPC1LQ4VXU2 614 aaKnown RBP16.1■□□□□ 0.17
SMPD4-216ENST00000461187 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
SMPD4-216ENST00000461187 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 NPAS3Q8IXF0 933 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 PJA1Q8NG27 643 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 ZNF461Q8TAF7 563 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
SMPD4-216ENST00000461187 NTPCRQ9BSD7 190 aaKnown RBP16.1■□□□□ 0.17
SMPD4-216ENST00000461187 TCHPQ9BT92 498 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 FOXQ1Q9C009 403 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 CNTN3Q9P232 1028 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 TSC2P49815 1807 aa16.1■□□□□ 0.17
SMPD4-216ENST00000461187 RALGAPA1Q6GYQ0 2036 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 ARHGEF37A1IGU5 675 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 WDR27A2RRH5 827 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 ABLIM3O94929 683 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 RHOP08100 348 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 GLULP15104 373 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 ATP2C1P98194 919 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-216ENST00000461187 SLC5A9Q2M3M2 681 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 HYIQ5T013 277 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 ADSSL1Q8N142 457 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 C18orf25Q96B23 403 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-216ENST00000461187 SHDQ96IW2 340 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 PNMA5Q96PV4 448 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 KXD1Q9BQD3 176 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
SMPD4-216ENST00000461187 NUP210Q8TEM1 1887 aaPredicted RBP16.09■□□□□ 0.17
SMPD4-216ENST00000461187 SYN3O14994 580 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 LRRN2O75325 713 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 HARSP12081 509 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 RPL9P32969 192 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 RAD51AP2Q09MP3 1159 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 MRPL58Q14197 206 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 ZRSR1Q15695 479 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 POTEHQ6S545 545 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 SYT2Q8N9I0 419 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
SMPD4-216ENST00000461187 DDX23Q9BUQ8 820 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 MRPS23Q9Y3D9 190 aaKnown RBP16.08■□□□□ 0.16
SMPD4-216ENST00000461187 CEP250Q9BV73 2442 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 KANSL1LA0AUZ9 987 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 TOM1L1O75674 476 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 MAPTP10636 758 aaKnown RBP16.07■□□□□ 0.16
SMPD4-216ENST00000461187 PLS3P13797 630 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 ATF2P15336 505 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SLC12A3P55017 1021 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 STRN3Q13033 797 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMPD4-216ENST00000461187 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SLC10A6Q3KNW5 377 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SLC44A4Q53GD3 710 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 RILPL1Q5EBL4 403 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 MCTP1Q6DN14 999 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 C1orf210Q8IVY1 113 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 MCRS1Q96EZ8 462 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SUSD3Q96L08 255 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 ANKFY1Q9P2R3 1169 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 R4GN57 208 aa16.07■□□□□ 0.16
SMPD4-216ENST00000461187 H7C4K7 107 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PRRG1O14668 218 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 SEC24AO95486 1093 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 LRG1P02750 347 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 SP9P0CG40 484 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 CEBPBP17676 345 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PTPN2P17706 415 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 ELF1P32519 619 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 SMTNP53814 917 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 ARPP19P56211 112 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PFKPQ01813 784 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PRKCQQ04759 706 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PRSS36Q5K4E3 855 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 ZPBP2Q6X784 338 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 TCEAL8Q8IYN2 117 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 KCTD17Q8N5Z5 321 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PLIN2Q99541 437 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 PLA2G2FQ9BZM2 168 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 GDE1Q9NZC3 331 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 KCNG1Q9UIX4 513 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 FBXL5Q9UKA1 691 aa16.06■□□□□ 0.16
SMPD4-216ENST00000461187 MTF2Q9Y483 593 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-216ENST00000461187 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms