RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 ABCB4P21439 1286 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 USP8P40818 1118 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 ACOT2P49753 483 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 AP3M2P53677 418 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 FMO1Q01740 532 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 LAMTOR4Q0VGL1 99 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 TDRD10Q5VZ19 366 aaKnown RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 C8orf74Q6P047 294 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 BRSK2Q8IWQ3 736 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 DDX1Q92499 740 aaKnown RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 ZBTB45Q96K62 511 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 PCDHB18PQ96TA0 734 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 GOLPH3Q9H4A6 298 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 VIPAS39Q9H9C1 493 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 SPC25Q9HBM1 224 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 STIM2Q9P246 746 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 AMFRQ9UKV5 643 aa18.14■□□□□ 0.49
YIPF3-205ENST00000460547 TTC7AQ9ULT0 858 aaPredicted RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 MKI67P46013 3256 aaKnown RBP18.14■□□□□ 0.49
YIPF3-205ENST00000460547 PLXNA1Q9UIW2 1896 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 PGRMC1O00264 195 aaKnown RBP18.13■□□□□ 0.49
YIPF3-205ENST00000460547 FAM189A1O60320 539 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 PGK1P00558 417 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 MARK3P27448 753 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 WNT7BP56706 349 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 TNNC1P63316 161 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 GPC5P78333 572 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 ARHGAP1Q07960 439 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 CASP8Q14790 479 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 WDR44Q5JSH3 913 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 SLC47A2Q86VL8 602 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 METTL13Q8N6R0 699 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 TATDN2Q93075 761 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 PDE11AQ9HCR9 933 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 ANKFY1Q9P2R3 1169 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 PTPRJQ12913 1337 aa18.13■□□□□ 0.49
YIPF3-205ENST00000460547 TNRC18O15417 2968 aaPredicted RBP18.13■□□□□ 0.49
YIPF3-205ENST00000460547 CLDN3O15551 220 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 TNNI1P19237 187 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 PIK3CAP42336 1068 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 LAMC2Q13753 1193 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 GLIPR1L2Q4G1C9 344 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 ZNF677Q86XU0 584 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 EMID1Q96A84 441 aaPredicted RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 DMGDHQ9UI17 866 aaKnown RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 ABLIM1O14639 778 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 VNN1O95497 513 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 PRKCBP05771 671 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 DNA2P51530 1060 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 BPIFB4P59827 614 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 MCL1Q07820 350 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 TFDP1Q14186 410 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 SMC1AQ14683 1233 aaKnown RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 MAPK6Q16659 721 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 TAPT1Q6NXT6 567 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 AENQ8WTP8 325 aaKnown RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 COPS5Q92905 334 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 LENG1Q96BZ8 264 aaPredicted RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 ACO2Q99798 780 aaKnown RBP18.12■□□□□ 0.49
YIPF3-205ENST00000460547 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.12■□□□□ 0.492e-9■■■■□ 22.7
YIPF3-205ENST00000460547 NFKBIZQ9BYH8 718 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 KATNBL1Q9H079 304 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 PDGFCQ9NRA1 345 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 ERAP1Q9NZ08 941 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 GTF3C4Q9UKN8 822 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 COG5Q9UP83 839 aa18.12■□□□□ 0.49
YIPF3-205ENST00000460547 ASAP2O43150 1006 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 CYP1A2P05177 515 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 MMEP08473 750 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 MATR3P43243 847 aaKnown RBP eCLIP18.11■□□□□ 0.49
YIPF3-205ENST00000460547 GPS2Q13227 327 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 ZBTB41Q5SVQ8 909 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 IQSEC1Q6DN90 963 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 WDR49Q8IV35 697 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 RNF149Q8NC42 400 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 HDAC7Q8WUI4 952 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 PI4K2AQ9BTU6 479 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 CARD9Q9H257 536 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 ACBD3Q9H3P7 528 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 SUGCTQ9HAC7 445 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 TRPC6Q9Y210 931 aa18.11■□□□□ 0.49
YIPF3-205ENST00000460547 MIF4GDA9UHW6 222 aaKnown RBP18.1■□□□□ 0.49
YIPF3-205ENST00000460547 CCDC188H7C350 402 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 OGTO15294 1046 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 DDX3YO15523 660 aaKnown RBP18.1■□□□□ 0.49
YIPF3-205ENST00000460547 CEP104O60308 925 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 GH1P01241 217 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 PROZP22891 400 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 TBXAS1P24557 533 aaPredicted RBP18.1■□□□□ 0.49
YIPF3-205ENST00000460547 ADCYAP1R1P41586 468 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 ATN1P54259 1190 aaPredicted RBP18.1■□□□□ 0.49
YIPF3-205ENST00000460547 FAM193AP78312 1265 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 POU5F1BQ06416 359 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 BIRC3Q13489 604 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 SURF1Q15526 300 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 CLUL1Q15846 466 aa18.1■□□□□ 0.49
YIPF3-205ENST00000460547 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms