RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 METTL13Q8N6R0 699 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 DPF3Q92784 378 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 HPS3Q969F9 1004 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 SCLT1Q96NL6 688 aa16.89■□□□□ 0.29
CMTM3-203ENST00000460097 NAP1L3Q99457 506 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-203ENST00000460097 TRIM6Q9C030 488 aaPredicted RBP16.89■□□□□ 0.29
CMTM3-203ENST00000460097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.89■□□□□ 0.29
CMTM3-203ENST00000460097 HAS3O00219 553 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 BACH1O14867 736 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 CHMP2AO43633 222 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 LGR5O75473 907 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 PSAPP07602 524 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 SUPT20HL2P0C7V6 817 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 SCP2P22307 547 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 SFNP31947 248 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 TXKP42681 527 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 STAT5BP51692 787 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 JAK3P52333 1124 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 SWSAP1Q6NVH7 229 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 TRIM50Q86XT4 487 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 GBP7Q8N8V2 638 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-203ENST00000460097 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 SLC43A3Q8NBI5 491 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 DDX12PQ92771 950 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 HES6Q96HZ4 224 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 NSRP1Q9H0G5 558 aaKnown RBP16.88■□□□□ 0.29
CMTM3-203ENST00000460097 STMN4Q9H169 189 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-203ENST00000460097 ADAMTS1Q9UHI8 967 aa16.88■□□□□ 0.29
CMTM3-203ENST00000460097 IGKV6D-21A0A0A0MT36 114 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 ZNF131P52739 623 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 RTP1P59025 263 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 DHX9Q08211 1270 aaKnown RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PPP2R5CQ13362 524 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 TRIM60Q495X7 471 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 FAM26FQ5R3K3 315 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 KRT79Q5XKE5 535 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 DPY19L2P1Q6NXN4 242 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PLPPR4Q7Z2D5 763 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 MIER3Q7Z3K6 550 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 RDM1Q8NG50 284 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 OR2W6PQ8NHA6 318 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 ATXN2LQ8WWM7 1075 aaKnown RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PCYT2Q99447 389 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PLCD4Q9BRC7 762 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 ERAP1Q9NZ08 941 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 NAGPAQ9UK23 515 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 VAV3Q9UKW4 847 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 ATP11BQ9Y2G3 1177 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 MROH7Q68CQ1 1323 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 EMSYQ7Z589 1322 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 DAPK3O43293 454 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 AGTP01019 485 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PTENP60484 403 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 MLLT1Q03111 559 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 COASYQ13057 564 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 FAM47CQ5HY64 1035 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 FAM160B1Q5W0V3 765 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 VPS36Q86VN1 386 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 C7orf31Q8N865 590 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 FMO2Q99518 471 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PACSIN1Q9BY11 444 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PABPC3Q9H361 631 aaKnown RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 ZNF302Q9NR11 478 aa16.87■□□□□ 0.29
CMTM3-203ENST00000460097 BMP2KQ9NSY1 1161 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 PACSIN2Q9UNF0 486 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-203ENST00000460097 GOLGA6L10A0A0M3HER8 536 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 EVI5O60447 810 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 PQBP1O60828 265 aaKnown RBP16.86■□□□□ 0.29
CMTM3-203ENST00000460097 GBP2P32456 591 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-203ENST00000460097 TLE2Q04725 743 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 PTPN11Q06124 597 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-203ENST00000460097 DHX34Q14147 1143 aaKnown RBP16.86■□□□□ 0.29
CMTM3-203ENST00000460097 C11orf91Q3C1V1 193 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 TNFAIP8L3Q5GJ75 292 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 C6orf118Q5T5N4 469 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 ANKRD33Q7Z3H0 272 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 PEX26Q7Z412 305 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 CCDC60Q8IWA6 550 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-203ENST00000460097 ATP8B4Q8TF62 1192 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 PPP1R13LQ8WUF5 828 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 TOX2Q96NM4 488 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 RNPEPQ9H4A4 650 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 GABBR1Q9UBS5 961 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 DAAM1Q9Y4D1 1078 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 PCDHA2Q9Y5H9 948 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 KDM3AQ9Y4C1 1321 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 SCN10AQ9Y5Y9 1956 aa16.86■□□□□ 0.29
CMTM3-203ENST00000460097 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 EML1O00423 815 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 MARK3P27448 753 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 SLC26A2P50443 739 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 CCNG1P51959 295 aa16.85■□□□□ 0.29
CMTM3-203ENST00000460097 PTK2Q05397 1052 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms