RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 KIAA1841Q6NSI8 718 aa17■□□□□ 0.31
SDF4-204ENST00000459994 PRSS55Q6UWB4 352 aaPredicted RBP17■□□□□ 0.31
SDF4-204ENST00000459994 SPATA31D4Q6ZUB0 917 aa17■□□□□ 0.31
SDF4-204ENST00000459994 HACE1Q8IYU2 909 aa17■□□□□ 0.31
SDF4-204ENST00000459994 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
SDF4-204ENST00000459994 HPS3Q969F9 1004 aa17■□□□□ 0.31
SDF4-204ENST00000459994 NOTCH4Q99466 2003 aa17■□□□□ 0.31
SDF4-204ENST00000459994 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
SDF4-204ENST00000459994 STRA6Q9BX79 667 aa17■□□□□ 0.31
SDF4-204ENST00000459994 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
SDF4-204ENST00000459994 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
SDF4-204ENST00000459994 DZANK1Q9NVP4 752 aa17■□□□□ 0.31
SDF4-204ENST00000459994 ARHGAP28Q9P2N2 729 aa17■□□□□ 0.31
SDF4-204ENST00000459994 ZMYM2Q9UBW7 1377 aa17■□□□□ 0.31
SDF4-204ENST00000459994 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 K7ERI5 159 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 ABLIM1O14639 778 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 SLC16A4O15374 487 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 PPP1R37O75864 691 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 NMT1P30419 496 aaKnown RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 PPP1R2P41236 205 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 EFNA5P52803 228 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 TUSC3Q13454 348 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 RTP2Q5QGT7 225 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 CES5AQ6NT32 575 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 CD300LGQ6UXG3 332 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 STXBP4Q6ZWJ1 553 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 EPM2AIP1Q7L775 607 aaPredicted RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 ZBTB33Q86T24 672 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 MLKLQ8NB16 471 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 KIAA0895Q8NCT3 520 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 TMEM161BQ8NDZ6 487 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 ZBTB45Q96K62 511 aaPredicted RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 ACO2Q99798 780 aaKnown RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 FUCA2Q9BTY2 467 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 TARS2Q9BW92 718 aaKnown RBP16.99■□□□□ 0.31
SDF4-204ENST00000459994 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 CDT1Q9H211 546 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 RXFP1Q9HBX9 757 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 TBC1D7Q9P0N9 293 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
SDF4-204ENST00000459994 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
SDF4-204ENST00000459994 RFPL2O75678 378 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 KIF20AO95235 890 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 ASGR2P07307 311 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 CCDC192P0DO97 292 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 OSTNP61366 133 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 GTF2BQ00403 316 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 TYRO3Q06418 890 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 SOX4Q06945 474 aaPredicted RBP16.98■□□□□ 0.31
SDF4-204ENST00000459994 STX1AQ16623 288 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 BMT2Q1RMZ1 405 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 CT47A1Q5JQC4 288 aaPredicted RBP16.98■□□□□ 0.31
SDF4-204ENST00000459994 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 TRIM67Q6ZTA4 783 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 GPR149Q86SP6 731 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 PPFIBP1Q86W92 1011 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 PALB2Q86YC2 1186 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 GUF1Q8N442 669 aaKnown RBP16.98■□□□□ 0.31
SDF4-204ENST00000459994 ZNF507Q8TCN5 953 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
SDF4-204ENST00000459994 ADPGKQ9BRR6 497 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
SDF4-204ENST00000459994 SFXN1Q9H9B4 322 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
SDF4-204ENST00000459994 UBE4BO95155 1302 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 TMEM221A6NGB7 291 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 K7ENM7 598 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 M0R296 226 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 GCNT3O95395 438 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 THP07101 528 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 PLA2G5P39877 138 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 MTHFRP42898 656 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 CASP5P51878 434 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 ZNF445P59923 1031 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 DCAF4L1Q3SXM0 396 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 ADSSL1Q8N142 457 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 C3orf58Q8NDZ4 430 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 GLIS3Q8NEA6 775 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 SCFD1Q8WVM8 642 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 ASIC4Q96FT7 647 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 RIPOR3Q96MK2 946 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 PPP1R10Q96QC0 940 aaKnown RBP16.97■□□□□ 0.31
SDF4-204ENST00000459994 FGFBP2Q9BYJ0 223 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 HAPLN2Q9GZV7 340 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 HCN4Q9Y3Q4 1203 aa16.97■□□□□ 0.31
SDF4-204ENST00000459994 PPP1R3GB7ZBB8 358 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 ADAM12O43184 909 aa16.96■□□□□ 0.31
SDF4-204ENST00000459994 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms