RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ARIH1Q9Y4X5 557 aaPredicted RBP9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 INSL6Q9Y581 213 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 PRUNE2Q8WUY3 3088 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 MUC3AQ02505 3323 aa9.4□□□□□ -0.9
CLTCL1-204ENST00000458188 TANC1Q9C0D5 1861 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 PES1O00541 588 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 SLC16A3O15427 465 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 HOXA2O43364 376 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 PHACTR2O75167 634 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 CLSTN1O94985 981 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 CA3P07451 260 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 TMEM191BP0C7N4 346 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 KCNE1P15382 129 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 SLC11A1P49279 550 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 CLCNKBP51801 687 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 BIRC3Q13489 604 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 NAB2Q15742 525 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 ZBTB6Q15916 424 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 TCP11X2Q5H9J9 407 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 INTS8Q75QN2 995 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 FRMD5Q7Z6J6 570 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 COLGALT2Q8IYK4 626 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 TMEM174Q8WUU8 243 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 CGRRF1Q99675 332 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 ASB7Q9H672 318 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 RC3H2Q9HBD1 1191 aaKnown RBP9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 AGAP1Q9UPQ3 857 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 LTBP2Q14767 1821 aa9.39□□□□□ -0.91
CLTCL1-204ENST00000458188 LINC01553A4QN01 128 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 GOLGA6L19H0YKK7 550 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 I3L4J1 428 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 NRP1O14786 923 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 IKBKBO14920 756 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 GNA14O95837 355 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TNNC2P02585 160 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 C4BPAP04003 597 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 ALDH2P05091 517 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 ITGB3P05106 788 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 ITGB1P05556 798 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 GALTP07902 379 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 POLR2BP30876 1174 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 BCAR1P56945 870 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 PLCB2Q00722 1185 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 KCNH2Q12809 1159 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 GRIK3Q13003 919 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 KRT31Q15323 416 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TDRD10Q5VZ19 366 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 FOXR2Q6PJQ5 311 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TRAPPC11Q7Z392 1133 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 WDR49Q8IV35 697 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CD302Q8IX05 232 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CMTR2Q8IYT2 770 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 LRRC43Q8N309 656 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 C1orf127Q8N9H9 656 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 C3orf58Q8NDZ4 430 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 BEST2Q8NFU1 509 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TMC2Q8TDI7 906 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 CACTINQ8WUQ7 758 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 SLC35C1Q96A29 364 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 ANKRD36BP1Q96IX9 119 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 UHRF1Q96T88 793 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 TUBGCP2Q9BSJ2 902 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 C17orf80Q9BSJ5 609 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 PI4K2AQ9BTU6 479 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 METTL14Q9HCE5 456 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 UBQLN1Q9UMX0 589 aaKnown RBP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLTCL1-204ENST00000458188 LAMA2P24043 3122 aaKnown RBP9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 RFXAPO00287 272 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 PODXLO00592 558 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 MAPK13O15264 365 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 SPTLC1O15269 473 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 INPPL1O15357 1258 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 B3GAT3O94766 335 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 KIF4AO95239 1232 aa9.37□□□□□ -0.91
CLTCL1-204ENST00000458188 VNN1O95497 513 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms