RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MAP4P27816 1152 aaKnown RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 HDAC4P56524 1084 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 CNBD2Q96M20 576 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 C2orf40Q9H1Z8 148 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 ZBTB12Q9Y330 459 aaPredicted RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 RPAP1Q9BWH6 1393 aaPredicted RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 SEZ6Q53EL9 994 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 DEPDC1Q5TB30 811 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 ICE2Q659A1 982 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 HS6ST3Q8IZP7 471 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 FAM20AQ96MK3 541 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 NME5P56597 212 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 MRPS15P82914 257 aaKnown RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 MRPL28Q13084 256 aaKnown RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 DUOXA2Q1HG44 320 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 APPL2Q8NEU8 664 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 ARHGEF38Q9NXL2 777 aa20.66■□□□□ 0.9
SNX27-204ENST00000458013 FARP1Q9Y4F1 1045 aaPredicted RBP20.66■□□□□ 0.9
SNX27-204ENST00000458013 PVALEFA0A1B0GWK0 134 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 WDR47O94967 919 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 MAP3K6O95382 1288 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 WEE2P0C1S8 567 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 TEDDM1Q5T9Z0 273 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 PPP1R18Q6NYC8 613 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 ANO9A1A5B4 782 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 KCNQ2O43526 872 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 DDHD2O94830 711 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 KRT4P19013 534 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 RABGAP1LQ5R372 815 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 COG1Q8WTW3 980 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 ACAD9Q9H845 621 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 JPH1Q9HDC5 661 aaPredicted RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 RBM12Q9NTZ6 932 aaKnown RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 ENO4A6NNW6 628 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 TXNP10599 105 aaKnown RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 CDK17Q00537 523 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 TMEM154Q6P9G4 183 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.65■□□□□ 0.9
SNX27-204ENST00000458013 FAM187AA6NFU0 413 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 EEF2KO00418 725 aaKnown RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 FKBP9O95302 570 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 TRPC1P48995 793 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 FKBP9P1Q75LS8 142 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 PCDHGB4Q9UN71 923 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 NPHP4O75161 1426 aaPredicted RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 C5orf58C9J3I9 102 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 SFNP31947 248 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 CCDC142Q17RM4 750 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 PLD3Q8IV08 490 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 ATPAF2Q8N5M1 289 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 PTPRN2Q92932 1015 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 VPS50Q96JG6 964 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 RERGLQ9H628 205 aa20.65■□□□□ 0.9
SNX27-204ENST00000458013 METTL5Q9NRN9 209 aaKnown RBP20.65■□□□□ 0.9
SNX27-204ENST00000458013 FOXO4P98177 505 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 LRRC71Q8N4P6 559 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 FAM136AQ96C01 138 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 SYTL2Q9HCH5 934 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 PNMA8BQ9ULN7 279 aaPredicted RBP20.64■□□□□ 0.9
SNX27-204ENST00000458013 AXIN2Q9Y2T1 843 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 PKP3Q9Y446 797 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 FHOD1Q9Y613 1164 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.64■□□□□ 0.9
SNX27-204ENST00000458013 HSPA1AP0DMV8 641 aaKnown RBP20.64■□□□□ 0.9
SNX27-204ENST00000458013 HSPA1BP0DMV9 641 aaKnown RBP20.64■□□□□ 0.9
SNX27-204ENST00000458013 PGBD3Q8N328 593 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 TRIM54Q9BYV2 358 aa20.64■□□□□ 0.9
SNX27-204ENST00000458013 MRPL40Q9NQ50 206 aaKnown RBP20.64■□□□□ 0.9
SNX27-204ENST00000458013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.92e-7■□□□□ 9.4
SNX27-204ENST00000458013 MDH1P40925 334 aaKnown RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 NBPF20Q3BBV1 942 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 CAPRIN2Q6IMN6 1127 aaKnown RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 LVRNQ6Q4G3 990 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 IPMKQ8NFU5 416 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 SLC7A14Q8TBB6 771 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 ATP11BQ9Y2G3 1177 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 ZDHHC9Q9Y397 364 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 NEU2Q9Y3R4 380 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 NCF1BA6NI72 391 aaPredicted RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 NCF1CA8MVU1 366 aaPredicted RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 NCF1P14598 390 aaPredicted RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 TRIM45Q9H8W5 580 aaPredicted RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 LOC102724159A0A0B4J2E5 919 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 MLH1P40692 756 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 PTK7Q13308 1070 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 PWP2Q15269 919 aaKnown RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 CCDC81Q6ZN84 652 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 KDM4CQ9H3R0 1056 aa20.64■□□□□ 0.89
SNX27-204ENST00000458013 ZC3H7BQ9UGR2 993 aaKnown RBP20.64■□□□□ 0.89
SNX27-204ENST00000458013 C2CD2LO14523 706 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 TRIM66O15016 1216 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 CCDC22O60826 627 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 PHF2O75151 1096 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 CDR2LQ86X02 465 aaPredicted RBP20.63■□□□□ 0.89
SNX27-204ENST00000458013 MDM1Q8TC05 714 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 SENP2Q9HC62 589 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 ACTR2P61160 394 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 PRPF39Q86UA1 669 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms