RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 C8AP07357 584 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 PLS3P13797 630 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 UBA7P41226 1012 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 HTR4Q13639 388 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 HYIQ5T013 277 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 LILRA6Q6PI73 481 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 SYT2Q8N9I0 419 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 CALML4Q96GE6 196 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 TBC1D32Q96NH3 1257 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 SPATA6Q9NWH7 488 aaPredicted RBP17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 DOCK8Q8NF50 2099 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 VPS37CA5D8V6 355 aaPredicted RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 CCL16O15467 120 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 XYLBO75191 536 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 TKTP29401 623 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 OR1D2P34982 312 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 BRCC3P46736 316 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 UPP1Q16831 310 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 SLC7A14Q8TBB6 771 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 SPIRE2Q8WWL2 714 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 AK8Q96MA6 479 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 RPP25Q9BUL9 199 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 KCND2Q9NZV8 630 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 NUB1Q9Y5A7 615 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 CDY1Q9Y6F8 540 aa17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 PDCD11Q14690 1871 aaKnown RBP17.22■□□□□ 0.35
CHCHD3-204ENST00000457942 GPR179Q6PRD1 2367 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 NPHP3-ACAD11A0A0J9YXS1 232 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 PODXLO00592 558 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 ADAM12O43184 909 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 BMP15O95972 392 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 HNRNPA1P09651 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 LAMP2P13473 410 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 FGFR3P22607 806 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 FSHRP23945 695 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 UBXN2BQ14CS0 331 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 BRAPQ7Z569 592 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 GRASPQ7Z6J2 395 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 GPBP1Q86WP2 473 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 MAML2Q8IZL2 1156 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 SUMF1Q8NBK3 374 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 DDX27Q96GQ7 796 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 ZBTB45Q96K62 511 aaPredicted RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 LARSQ9P2J5 1176 aaKnown RBP17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 MTRRQ9UBK8 725 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 MIA3Q5JRA6 1907 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
CHCHD3-204ENST00000457942 FANCMQ8IYD8 2048 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 DOCK6Q96HP0 2047 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 PATJQ8NI35 1801 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 H0YCG3 227 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 CLDN3O15551 220 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 TOM1L1O75674 476 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 FAM13AO94988 1023 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 MAPTP10636 758 aaKnown RBP17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 PROZP22891 400 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 NTHL1P78549 312 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 AXDND1Q5T1B0 1012 aaPredicted RBP17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 ANKS3Q6ZW76 656 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 C3orf58Q8NDZ4 430 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 TMEM161BQ8NDZ6 487 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 FGF14Q92915 247 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
CHCHD3-204ENST00000457942 K7ENM7 598 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 LAMTOR5O43504 91 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 SLC26A4O43511 780 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 KCNE1P15382 129 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 CD72P21854 359 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 IGFBP6P24592 240 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 MCM4P33991 863 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 LIG4P49917 911 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 ARPP19P56211 112 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 GPC5P78333 572 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 CSTF1Q05048 431 aaKnown RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 RAB33AQ14088 237 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 PARM1Q6UWI2 310 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 ZPBP2Q6X784 338 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 REEP2Q9BRK0 252 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 NTPCRQ9BSD7 190 aaKnown RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 CNTN3Q9P232 1028 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 ODF2LQ9ULJ1 636 aa17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 MTF2Q9Y483 593 aaPredicted RBP17.19■□□□□ 0.34
CHCHD3-204ENST00000457942 ANHXE9PGG2 379 aa17.18■□□□□ 0.34
CHCHD3-204ENST00000457942 ABLIM1O14639 778 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms