RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ENOX2Q16206 610 aaKnown RBP25.19■■□□□ 1.62
CBX3-204ENST00000456948 FAM26FQ5R3K3 315 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 SLC39A4Q6P5W5 647 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 BEST2Q8NFU1 509 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 HDAC7Q8WUI4 952 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 PIK3R5Q8WYR1 880 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 CCDC47Q96A33 483 aaKnown RBP25.19■■□□□ 1.62
CBX3-204ENST00000456948 ADAM7Q9H2U9 754 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 SFXN1Q9H9B4 322 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 GOLGA2P5Q9HBQ8 144 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 SERTAD1Q9UHV2 236 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 DERAQ9Y315 318 aa25.19■■□□□ 1.62
CBX3-204ENST00000456948 TCHHQ07283 1943 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 EIF3DO15371 548 aaKnown RBP eCLIP25.18■■□□□ 1.62
CBX3-204ENST00000456948 PRPF6O94906 941 aaKnown RBP25.18■■□□□ 1.62
CBX3-204ENST00000456948 PAX3P23760 479 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 MTHFRP42898 656 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 ACOT2P49753 483 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 SOX4Q06945 474 aaPredicted RBP25.18■■□□□ 1.62
CBX3-204ENST00000456948 PSMD5Q16401 504 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 ATAT1Q5SQI0 421 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 SYCE2Q6PIF2 218 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 ANKS3Q6ZW76 656 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 C18orf25Q96B23 403 aaPredicted RBP25.18■■□□□ 1.62
CBX3-204ENST00000456948 B3GALT6Q96L58 329 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 PLEKHA4Q9H4M7 779 aa25.18■■□□□ 1.62
CBX3-204ENST00000456948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.17■■□□□ 1.62
CBX3-204ENST00000456948 FAM189A1O60320 539 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 IL18RAPO95256 599 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 ADRB2P07550 413 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 CBX2Q14781 532 aaPredicted RBP25.17■■□□□ 1.62
CBX3-204ENST00000456948 RTP2Q5QGT7 225 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 PAGE5Q96GU1 130 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 S1PR5Q9H228 398 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 BLZF1Q9H2G9 400 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 CD320Q9NPF0 282 aa25.17■■□□□ 1.62
CBX3-204ENST00000456948 UBE4BO95155 1302 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 SYN3O14994 580 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 FGFR3P22607 806 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 CASP5P51878 434 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 SNRPFP62306 86 aaKnown RBP25.16■■□□□ 1.62
CBX3-204ENST00000456948 KCNA1Q09470 495 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 TMEM132DQ14C87 1099 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 RARS2Q5T160 578 aaKnown RBP25.16■■□□□ 1.62
CBX3-204ENST00000456948 ARMCX5Q6P1M9 558 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 PALB2Q86YC2 1186 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 NT5DC4Q86YG4 428 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 FSIP1Q8NA03 581 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 APPL2Q8NEU8 664 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 APOL5Q9BWW9 433 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 PHF7Q9BWX1 381 aaPredicted RBP25.16■■□□□ 1.62
CBX3-204ENST00000456948 HPSEQ9Y251 543 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 C2CD2Q9Y426 696 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 BDP1A6H8Y1 2624 aa25.16■■□□□ 1.62
CBX3-204ENST00000456948 ARHGEF37A1IGU5 675 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 H7C4K7 107 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 TULP1O00294 542 aaPredicted RBP25.15■■□□□ 1.62
CBX3-204ENST00000456948 LRPAP1P30533 357 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 MCM4P33991 863 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 ZP2Q05996 745 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 SPAG1Q07617 926 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 PSMD2Q13200 908 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 CUL4BQ13620 913 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 ZBTB6Q15916 424 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 ZBTB41Q5SVQ8 909 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 CYP26C1Q6V0L0 522 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 HS2ST1Q7LGA3 356 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 LNX1Q8TBB1 728 aaPredicted RBP25.15■■□□□ 1.62
CBX3-204ENST00000456948 ZNF507Q8TCN5 953 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 SUSD6Q92537 303 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 FAM213AQ9BRX8 229 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 MAN1C1Q9NR34 630 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 TUBGCP4Q9UGJ1 667 aa25.15■■□□□ 1.62
CBX3-204ENST00000456948 FAM237AA0A1B0GTK4 181 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 TISP43B9A030 160 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 ACTN4O43707 911 aaKnown RBP25.14■■□□□ 1.62
CBX3-204ENST00000456948 ADSSP30520 456 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 SPATA1Q5VX52 437 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 KANK3Q6NY19 840 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 PRSS55Q6UWB4 352 aaPredicted RBP25.14■■□□□ 1.62
CBX3-204ENST00000456948 CACTINQ8WUQ7 758 aaKnown RBP25.14■■□□□ 1.62
CBX3-204ENST00000456948 KIAA1586Q9HCI6 787 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 EXOC1Q9NV70 894 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 NR2E1Q9Y466 385 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 BACE2Q9Y5Z0 518 aa25.14■■□□□ 1.62
CBX3-204ENST00000456948 MEFVO15553 781 aaPredicted RBP25.13■■□□□ 1.61
CBX3-204ENST00000456948 EXTL3O43909 919 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 ANP32AP39687 249 aaKnown RBP25.13■■□□□ 1.61
CBX3-204ENST00000456948 NDUFA8P51970 172 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 JADE1Q6IE81 842 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 C15orf39Q6ZRI6 1047 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 GLYCTKQ8IVS8 523 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 NOC3LQ8WTT2 800 aaKnown RBP25.13■■□□□ 1.61
CBX3-204ENST00000456948 CHAMP1Q96JM3 812 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 SUSD3Q96L08 255 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 EPHX3Q9H6B9 360 aa25.13■■□□□ 1.61
CBX3-204ENST00000456948 CGNQ9P2M7 1197 aaKnown RBP25.13■■□□□ 1.61
CBX3-204ENST00000456948 CIZ1Q9ULV3 898 aaPredicted RBP25.13■■□□□ 1.61
CBX3-204ENST00000456948 TGM5O43548 720 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 RPL17P18621 184 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms