RNA–Protein interactions for RNA: ENST00000456708.5

ATG9A-217, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-217ENST00000456708 ZSWIM2Q8NEG5 633 aa19.25■□□□□ 0.67
ATG9A-217ENST00000456708 TTPALQ9BTX7 342 aa19.25■□□□□ 0.67
ATG9A-217ENST00000456708 I3L4J1 428 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 KLRC4O43908 158 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 RPL17P18621 184 aaKnown RBP19.24■□□□□ 0.67
ATG9A-217ENST00000456708 GARTP22102 1010 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 RPL9P32969 192 aaKnown RBP19.24■□□□□ 0.67
ATG9A-217ENST00000456708 HOXD13P35453 343 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 ZBTB6Q15916 424 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 EPM2AIP1Q7L775 607 aaPredicted RBP19.24■□□□□ 0.67
ATG9A-217ENST00000456708 GLYCTKQ8IVS8 523 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 CD302Q8IX05 232 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 SMRP1Q8NCR6 262 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 ZNF507Q8TCN5 953 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 SAAL1Q96ER3 474 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 PCIF1Q9H4Z3 704 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 SLC39A2Q9NP94 309 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 UBQLN1Q9UMX0 589 aaKnown RBP19.24■□□□□ 0.67
ATG9A-217ENST00000456708 FAM50BQ9Y247 325 aa19.24■□□□□ 0.67
ATG9A-217ENST00000456708 GOLGA8IPA6NC78 632 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 GOLGA8JA6NMD2 632 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 ADH1AP07327 375 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 CLCN4P51793 760 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 GUCY2FP51841 1108 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 SMAD2Q15796 467 aaKnown RBP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 JADE1Q6IE81 842 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 GPR65Q8IYL9 337 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 C12orf76Q8N812 135 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 CBWD1Q9BRT8 395 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 FAM213AQ9BRX8 229 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 S1PR5Q9H228 398 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 FNIP2Q9P278 1114 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 CIZ1Q9ULV3 898 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 USP15Q9Y4E8 981 aaPredicted RBP19.23■□□□□ 0.67
ATG9A-217ENST00000456708 NCOR1O75376 2440 aa19.23■□□□□ 0.67
ATG9A-217ENST00000456708 SCN1AP35498 2009 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 XPOTO43592 962 aaKnown RBP19.22■□□□□ 0.67
ATG9A-217ENST00000456708 TRAPPC3O43617 180 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 ZNF202O95125 648 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 NFICP08651 508 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 PRR29P0C7W0 189 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 HOXB8P17481 243 aaPredicted RBP19.22■□□□□ 0.67
ATG9A-217ENST00000456708 CYP3A5P20815 502 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 FGFR3P22607 806 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 TKTP29401 623 aaKnown RBP19.22■□□□□ 0.67
ATG9A-217ENST00000456708 PSMD5Q16401 504 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 KMT5BQ4FZB7 885 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 KANK3Q6NY19 840 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 KRBA2Q6ZNG9 492 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 PALB2Q86YC2 1186 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 LNX1Q8TBB1 728 aaPredicted RBP19.22■□□□□ 0.67
ATG9A-217ENST00000456708 NOC3LQ8WTT2 800 aaKnown RBP19.22■□□□□ 0.67
ATG9A-217ENST00000456708 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 PIK3R5Q8WYR1 880 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 FBXL18Q96ME1 805 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 NUB1Q9Y5A7 615 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 XIRP2A4UGR9 3374 aa19.22■□□□□ 0.67
ATG9A-217ENST00000456708 GOLGA6L4A6NEF3 574 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 TULP1O00294 542 aaPredicted RBP19.21■□□□□ 0.67
ATG9A-217ENST00000456708 LDHAP00338 332 aaKnown RBP19.21■□□□□ 0.67
ATG9A-217ENST00000456708 LRPAP1P30533 357 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 ANP32AP39687 249 aaKnown RBP19.21■□□□□ 0.67
ATG9A-217ENST00000456708 POU5F1Q01860 360 aaKnown RBP19.21■□□□□ 0.67
ATG9A-217ENST00000456708 TMEM132DQ14C87 1099 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 RARS2Q5T160 578 aaKnown RBP19.21■□□□□ 0.67
ATG9A-217ENST00000456708 SPATA1Q5VX52 437 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 ASB7Q9H672 318 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 EXOC1Q9NV70 894 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 DZANK1Q9NVP4 752 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 UBE4BO95155 1302 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 C2orf16Q68DN1 1984 aa19.21■□□□□ 0.67
ATG9A-217ENST00000456708 GLUD1P00367 558 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 MYL1P05976 194 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 SPATA31D3P0C874 917 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 MCM4P33991 863 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 CREMQ03060 361 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 SPATA31D4Q6ZUB0 917 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 BRSK2Q8IWQ3 736 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 BEST2Q8NFU1 509 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 CLSTN3Q9BQT9 956 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 CDH22Q9UJ99 828 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 DERAQ9Y315 318 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.2■□□□□ 0.66
ATG9A-217ENST00000456708 A0A0C4DFX4 3053 aa19.2■□□□□ 0.66
ATG9A-217ENST00000456708 TTC28Q96AY4 2481 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 SPDYE4A6NLX3 237 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 TNFRSF10AO00220 468 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 PPEF2O14830 753 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 CLIC2O15247 247 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 TGFB1I1O43294 461 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 TGM5O43548 720 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 EXTL3O43909 919 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 IL18RAPO95256 599 aa19.19■□□□□ 0.66
ATG9A-217ENST00000456708 RPN1P04843 607 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms